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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7yxaA_

Fold library idPDB HeaderMoleculeTitle
c7yxaA_2.20PDB header: membrane proteinChain: A: PDB Molecule: sphingosine 1-phosphate receptor 5,soluble cytochrome b562;


Added to library: Sat Aug 13 09:35:04 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LRPAPVSEVIVLHYNYTGKLRGARYQPGAGLRADAVVCLAVCAFIVLENLAVLLVLGRHPRFHAPMFLLL
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Known secondary structure (DSSP)



SS
TT
STTT


TT



SGGG
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence GSLTLSDLLAGAAYAANILLSGPLTLKLSPALWFAREGGVFVALTASVLSLLAIALERSLTSRGRTLAMA
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Known secondary structure (DSSP) T
GGGGGGS




 .........150.........160.........170.........180.........190.........200.........210
Sequence AAAWGVSLLLGLLPALGWNCLGRLDACSTVLPLYAKAYVLFCVLAFVGILAAICALYARIYCQVRANAAD
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Known secondary structure (DSSP) T
BSSS
GGGB
SSSTTBB
 .........220.........230.........240.........250.........260.........270.........280
Sequence LEDNWETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQKAEMKDFRHGFDILVGQIDDALKLANEGKVK
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Known secondary structure (DSSP) TT
SS



TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence EAQAAAEQLKTTRNARSLALLRTLSVVLLAFVACWGPLFLLLLLDVACPARTCPVLLQADPFLGLAMANS
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Known secondary structure (DSSP) TTTT



TTS
TTS
GGGG

 .........360.........370.....
Sequence LLNPIIYTLTNRDLRHALLRLVGRP
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Known secondary structure (DSSP)



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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