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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7yfrC_

Fold library idPDB HeaderMoleculeTitle
c7yfrC_5.10PDB header: electron transportChain: C: PDB Molecule: glutamate receptor ionotropic, nmda 1;


Added to library: Sat Apr 15 11:36:10 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IGAVLKHEQMFREAVNQANKRKIQLNATSVTHKPNAIQMALSVCEDLISSQVYILVSHPPTHFTPTPVSY
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 .........80.........90.........100.........110.........120.........130.........140
Sequence TAGFYRIPVLGLTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEGRAAQKR
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Known secondary structure (DSSP) T

SS


GGGG
SSS
TTSS

TT



SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LETLLEERESKAEKVLQFDPGNVTALLMEAKELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLVGE
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Known secondary structure (DSSP) TTTTT


S




TSSB



TTTTSTT


 .........220.........230.........240.........250.........260.........270.........280
Sequence REISGNALRYAPDGILGLQLINGKNESAHISDAVGVVAQAVHELLNITDPPRGCVGNTNIWKTGPLFKRV
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TT
SS
S










SS

S

T
 .........290.........300.........310.........320.........330.........340.........350
Sequence LMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYNGTHVIPNDRKIIWPGGETEKPRGYQM
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B

S
SSSS

TTS
S

SSS

SS
B
S
SS



TT

SS


SB

 .........360.........370.........380.........390.........400.........410.........420
Sequence STRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVICTGPNPRHTVPQCCYGFCIDLLIKLARTM
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Known secondary structure (DSSP)
S

BTTTB

TTS




B
TTS
B


B








ST
 .........430.........440.........450.........460.........470.........480.........490
Sequence NFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTI
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Known secondary structure (DSSP) T

SS
S



TTSS

GGGTSS
S

SB



S



 .........500.........510.........520.........530.........540.........550.........560
Sequence LVKKEIPRSTLDSFMQPFQSTLWLTLSSAMWFSWGFSARILGMVWAGFAMIIVASYTANLAAFLVLITGI
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SSSS
SST







ST
 .........570.........580.........590.........600.........610.........620.........630
Sequence NDPRLRNPSDKFIYATVKQSSVDIYFRRQVCLSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLE
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Known secondary structure (DSSP) T
S

TT


BTTSSSTTS
BS
TTS
S
 .........640.........650.........660.........670.........680.........690.
Sequence FEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQEC
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Known secondary structure (DSSP) STTS

S




TT
TSTTSS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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