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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7yfnT_

Fold library idPDB HeaderMoleculeTitle
c7yfnT_3.80PDB header: transferaseChain: T: PDB Molecule: transcription-associated protein 1;


Added to library: Sat Mar 11 10:09:10 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QVLLQSLNQMILTARLPHERELYVELCITVPYLPFLMKPLVFALQQYPDLVSQGLRTLELCIAEYFDPII
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Known secondary structure (DSSP)




SSSSTT



SS

STT


T
 .........80.........90.........100.........110.........120.........130.........140
Sequence EPVIDDVSKALFNLLQPQPFNHAISHNVVRILGKLGGRNRQFLKPPTDLTEKTELDIDAIADFKINGMPE
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Known secondary structure (DSSP)


SSS
TTTTTTTT

S







GGG



BSSSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence DVPLSVTPGIQSALNILQSYKSDIHYRKSAYKYLTCVLLLMTKSSAEFPTNYTELLKTAVNSIKLERIGI
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Known secondary structure (DSSP)


SS
SSS



ST

S


 .........220.........230.........240.........250.........260.........270.........280
Sequence EKNFDLEPTVNKRDYSNQENLFLRLLESVFYATSIKELKDDAMDLLNNLLDHFCLLQVNTTLLNKRNYNG
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TSTTTSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence TFNIDLKNPNFMLDSSLILDAIPFALSYYIPEVREVGVLAYKRIYEKSCLIYGEELALSHSFIPELAKQF
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Known secondary structure (DSSP) SS






TT


STSS

SSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence IHLCYDETYYNKRGGVLGIKVLIDNVKSSSVFLKKYQYNLANGLLFVLKDRMEQPFLVGTRVEDIGIRKR
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Known secondary structure (DSSP) SSSSSS
SS



TTS

 .........430.........440.........450.........460.........470.........480.........490
Sequence FMTILDNSLERDIKERLYYVIRDQNWEFIADYPWLNQALQLLYGSFNREKELSLKNIYCLSPPSILQEYL
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Known secondary structure (DSSP) S
S
SS



TTS

SB


S



SS


S

T

 .........500.........510.........520.........530.........540.........550.........560
Sequence PENAEMVTEVNDLELSNFVKGHIASMQGLCRIISSDFIDSLIEIFYQDPKAIHRAWVTLFPQVYKSIPKN
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Known secondary structure (DSSP) GGG



SS
S

T



TTTSS
TT
 .........570.........580.........590.........600.........610.........620.........630
Sequence EKYGFVRSIITLLSKPYHTRQISSRTNVINMLLDSISKIESLELPPHLVKYLAISYNAWYQSINILESIQ
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Known secondary structure (DSSP) SS
SSS




SSSSSS
S


TT
TTGGGGGGSS
 .........640.........650.........660.........670.........680.........690.........700
Sequence SNTSIDNTKIIEANEDALLELYVNLQEEDMFYGLWRRRAKYTETNIGLSYEQIGLWDKAQQLYEVAQVKA
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Known secondary structure (DSSP) S
STTTT



T
T
 .........710.........720.........730.........740.........750.........760.........770
Sequence RSGALPYSQSEYALWEDNWIQCAEKLQHWDVLTELAKHEGFTDLLLECGWRVADWNSDRDALEQSVKSVM
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Known secondary structure (DSSP) TTTS


TTTS
TTTTS



SS



SSST
 .........780.........790.........800.........810.........820.........830.........840
Sequence DVPTPRRQMFKTFLALQNFAESRKGDQEVRKLCDEGIQLSLIKWVSLPIRYTPAHKWLLHGFQQYMEFLE
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Known secondary structure (DSSP) SS

STT

S
S
SS

 .........850.........860.........870.........880.........890.........900.........910
Sequence ATQIYANLHTTTVQNLDSKAQEIKRILQAWRDRLPNTWDDVNMWNDLVTWRQHAFQVINNAYLPLIPALQ
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Known secondary structure (DSSP)

S

TTTS



TTS
SGGGSTT

 .........920.........930.........940.........950.........960.........970.........980
Sequence AYRGYHEIAWVINRFAHVARKHNMPDVCISQLARIYTLPNIEIQEAFLKLREQAKCHYQNMNELTTGLDV
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Known secondary structure (DSSP)

SS

S
TS

SS


TTTS
GGGTTTTTTT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence ISNTNLVYFGTVQKAEFFTLKGMFLSKLRAYEEANQAFATAVQIDLNLAKAWAQWGFFNDRRLSEEPNNI
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Known secondary structure (DSSP) TTSS


SS

SSTT

S

S
TT
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence SFASNAISCYLQAAGLYKNSKIRELLCRILWLISIDDASGMLTNAFDSFRGEIPVWYWITFIPQLLTSLS
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Known secondary structure (DSSP)


S
SS

T


S
S

S


GGGGGGG
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence HKEANMVRHILIRIAKSYPQALHFQLRTTKEDFAVIQRQPWEYLQELNNILKTAYPLLALSLESLVAQIN
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Known secondary structure (DSSP) SSS
TT



SS
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence DRFKSTTDEDLFRLINVLLIDGTLNYNRLPFPRKNPKLPENTEKNLVKFSTTLLAPYIRPKFNADFIDNK
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Known secondary structure (DSSP)



SS
SS
SS



TTTTS
TTTS
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence PDYETYIKRLRYWRRRLENKLDRASKKENLEVLCPHLSNFHHQKFEDIEIPGQYLLNKDNNVHFIKIARF
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Known secondary structure (DSSP)

SSS
S

TTTTS
SS

B
TT
SSS

SS
S


B
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence LPTVDFVRGTHSSYRRLMIRGHDGSVHSFAVQYPAVRHSRREERMFQLYRLFNKSLSKNVETRRRSIQFN
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Known secondary structure (DSSP)
SS
SS
SSS
S


TTSTTTTTTT



 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence LPIAIPLSPQVRIMNDSVSFTTLHEIHNEFCKKKGFDPDDIQDFMADKLNAAHDDALPAPDMTILKVEIF
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Known secondary structure (DSSP)


SSSS



SSSSS
TTSSSS


 .........1480.........1490.........1500.........1510.........1520.........1530.........1540
Sequence NSIQTMFVPSNVLKDHFTSLFTQFEDFWLFRKQFASQYSSFVFMSYMMMINNRTPHKIHVDKTSGNVFTL
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Known secondary structure (DSSP) SS
TTSSSTTT




GGGTTTT
 .........1550.........1560.........1570.........1580.........1590.........1600.........1610
Sequence EMLPSRFPYERVPDSPIFHNNEPVPFRLTPNIQSLIGDSALEGIFAVNLFTISRALIEPDNELNTYLALF
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Known secondary structure (DSSP) S




TT









SSSS



T
SSS
 .........1620.........1630.........1640.........1650.........1660.........1670.........1680
Sequence IRDEIISWFSNLHRPIIENPQLREMVQTNVDLIIRKVAQLGHLNSTPTVTTQFILDCIGSAVSPRNLART
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Known secondary structure (DSSP) SS
TT


S


SS


SS
TS
 ........
Sequence DVNFMPWF
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SS confidence







Known secondary structure (DSSP)
GGG
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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