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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7yfmB_

Fold library idPDB HeaderMoleculeTitle
c7yfmB_5.10PDB header: electron transportChain: B: PDB Molecule: glutamate receptor ionotropic, nmda 2d;


Added to library: Sat Apr 1 12:27:32 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PLNVALVFSYAAEAARLGPAVAAAVRLDVRPVALVLNDPRSLVLQLCDLLSGLRVFEDDSAVAPILDFLS
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T












T


B




 .........80.........90.........100.........110.........120.........130.........140
Sequence AQTSLPIVAVGAALTPKEKGSTFLQSTEQQLQVIFEVLEEYFVAVTTRAPGHRAFLSYIEVLTDGSLVGW
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Known secondary structure (DSSP) T



B








SS







SS
TTTT


 .........150.........160.........170.........180.........190.........200.........210
Sequence EHRAGEAVLSAQLVSAQIRLLFCAREEAEPVFRAAEEAGLTGSGYVWFMVGPQLPLPAGLFAVRSAGWRD
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Known secondary structure (DSSP) S






S

TTTTTGGGTSTTSTTS


S




SSS
SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence DLARRVAAGVAVVARGAQALLRDYGELGHESLHRYFMNITWDNRDYSFNEDGFLVNPSLVVISLTRDRTW
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Known secondary structure (DSSP)
TGGG






GGGG
S


GGGS


B
TTS
BSS


TT

 .........290.........300.........310.........320.........330.........340.........350
Sequence EVVGSWEQQTLRLKYPLWSRYGRFLQPVQHLTVATLEERPFVIVEPADPISGTCIRDSVPCRSQLNRPEK
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Known secondary structure (DSSP) TT


SSSGGGT








SSS


TTTSS

TTSB










 .........360.........370.........380.........390.........400.........410.........420
Sequence RCCKGFCIDILKRLAHTIGFSYDLYLVTNGKHGKKIDGVWNGMIGEVFYQRADMAIGSLTINEERSEIVD
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Known secondary structure (DSSP) ST


S
SS


BTTB

TTSSS
SS
B


 .........430.........440.........450.........460.........470.........480.........490
Sequence FSVPFVETGISVMVARVWAFFAVIFLASYTANLAAFMIGLSDRKFQRPQEQYPPLKFGTVPNGSTEKNIR
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T

TTS
SSSS

SS




TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence SNYPDMHSYMVRYNQPRVEEALTQLKAGKLDAFIYDAAVLNYMARKDEGCKLVTIGSGKVFATTGYGIAL
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Known secondary structure (DSSP)
TTS


S
TT




SS



SSSS




B
 .........570.........580.........590......
Sequence HKGSRWKRPIDLALLQFLGDDEIEMLERLWLSGICH
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Known secondary structure (DSSP)
TT
TTTT
S

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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