Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7yfiB_

Fold library idPDB HeaderMoleculeTitle
c7yfiB_3.30PDB header: membrane proteinChain: B: PDB Molecule: glutamate receptor;


Added to library: Sat Apr 1 12:29:42 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LNIAVLLGHSHDVTERELRNLWGPEQATGLPLDVNVVALLMNRTDPKSLITHVCDLMSGARIHGLVFGDD
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)


SGGG

TTTSSSSSS
SSS







TT





S
 .........80.........90.........100.........110.........120.........130.........140
Sequence TDQEAVAQMLDFISSQTFIPILGIHGGASMIMADKDPTSTFFQFGASIQQQATVMLKIMQDYDWHVFSLV
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) S

T



STTTTS

S


TT

SS

TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence TTIFPGYRDFISFIKTTVDNSFVGWDMQNVITLDTSFEDAKTQVQLKKIHSSVILLYCSKDEAVLILSEA
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP)
S
TTT
SS



S
S
SST


SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence RSLGLTGYDFFWIVPSLVSGNTELIPKEFPSGLISVSYDDWDYSLEARVRDGLGILTTAASSMLEKFSYI
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) T

SSS


SSS


TT

TT



SSS

S

 .........290.........300.........310.........320.........330.........340.........350
Sequence PEAKASCYGQAEKPETPLHTLHQFMVNVTWDGKDLSFTEEGYQVHPRLVVIVLNKDREWEKVGKWENQTL
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)



S
SS
STTS



SS
STTTTTS
TT

B
TTS
BSS



TTS
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence SLRHAVWPRYKSFSDCEPDDNHLSIVTLEEAPFVIVEDIDPLTETCVRNTVPCRKFVKINNSTNEGMNVK
Predicted secondary structure
















































SS confidence





































































Known secondary structure (DSSP) S
SS




SSSSS



S

BTTTB


TTTSS

TT
SSSS


 .........430.........440.........450.........460.........470.........480.........490
Sequence KCCKGFCIDILKKLSRTVKFTYDLYLVTNGKHGKKVNNVWNGMIGEVVYQRAVMAVGSLTINEERSEVVD
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) ST


S
SSTTTTS
S
SS
B

TTS
 .........500.........510.........520.........530.........540.........550.........560
Sequence FSVPFVETGISVMVSRTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFM
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP)


S


TTTTT









 .........570.........580.........590.........600.........610.........620.........630
Sequence IQEEFVDQVTGLSDKKFQRPHDYSPPFRFGTVPNGSTERNIRNNYPYMHQYMTRFNQRGVEDALVSLKTG
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)









TTS
GGGSSS




SSS
GGG

S
T
 .........640.........650.........660.........670.........680.........690.........700
Sequence KLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATTGYGIALQKGSPWKRQIDLALLQFVGDGEMEELET
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) S
SSTT
SSSSS
SS




TT
TTT
 .........710.........720.........730....
Sequence LWLTGICHLDIDNMAGVFYMLAAAMALSLITFIW
Predicted secondary structure






SS confidence

































Known secondary structure (DSSP) S

S



STT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D