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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7ydqA_

Fold library idPDB HeaderMoleculeTitle
c7ydqA_4.04PDB header: membrane proteinChain: A: PDB Molecule: nucleoside transporter 1,green fluorescent protein;


Added to library: Sat Apr 29 08:35:21 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LSSKQHFMLSLTFILIGLSSLNVWNTALGLNINFKYNTFQITGLVCSSIVALFVEIPKIMLPFLLGGLSI
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Known secondary structure (DSSP)

TT


S


S

 .........80.........90.........100.........110.........120.........130.........140
Sequence LCAGFQISHSFFTDTQFDTYCLVAFIVIGVVAGLAQTIAFNIGSTMEDNMGGYMSAGIGISGVFIFVINL
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Known secondary structure (DSSP) S
SSS

 .........150.........160.........170.........180.........190.........200.........210
Sequence LLDQFVSPEKHYGVNKAKLLALYIICELCLILAIVFCVCNLDLTNATLSYMELFKDSYKAILTMFLVNWL
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Known secondary structure (DSSP) TT




SSSS
SSSSSS







S

TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence TLQLFPGVGHKKWQESHNISDYNVTIIVGMFQVFDFLSRYPPNLTHIKIFKNFTFSLNKLLVANSLRLLF
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Known secondary structure (DSSP) TTTTTT


TTSTTT

SSSTTTTSS

SGGGGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence IPWFILNACVDHPFFKNIVQQCVCMAMLAFTNGWFNTVPFLVFVKELKSKGEELFTGVVPILVELDGDVN
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Known secondary structure (DSSP)


GGG

TTSSSSTTTT


TTGGGGSS
T
 .........360.........370.........380.........390.........400.........410.........420
Sequence GHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTLTYGVQCFSRYPDHMKQHDFFKSAMPEGYV
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Known secondary structure (DSSP) TTTTTTTSS
SS
TT
-



TT
B

TTTGGG
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence QERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKNGIKA
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Known secondary structure (DSSP) TTS
TTS

TTSTTTTT
B
S


TTTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence NFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKRDHMVLLEFVTAAGITKKK
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Known secondary structure (DSSP) BTTS
SSSS





S

TT

SSS



 .........570.........580.........590........
Sequence KEIEIISTFLVIAMFVGLFCGIWTTYIYNLFNIVLPKP
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Known secondary structure (DSSP) GGGGGGSS

S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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