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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7yahA_

Fold library idPDB HeaderMoleculeTitle
c7yahA_3.12PDB header: transport proteinChain: A: PDB Molecule: calcium-transporting atpase type 2c member 1;


Added to library: Sat Mar 25 11:42:23 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VLTSKKASELPVSEVASILQADLQNGLNKCEVSHRRAFHGWNEFDISPLWKKYISQFKNPLIMLLLASAV
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Known secondary structure (DSSP)


S
TT

TTT


T

SS
S


GGGS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ISVLMHQFDDAVSITVAILIVVTVAFVQEYRSEKSLEELSKLVPPECHCVREGKLEHTLARDLVPGDTVC
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Known secondary structure (DSSP) TT
S

SSSSGGG

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LSVGDRVPADLRLFEAVDLSIDESSLTGETTPCSKVTAPQPAASRSNIAFMGTLVRCGKAKGVVIGTGEN
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Known secondary structure (DSSP)
TT
B

S
TTTTS

SS






SS
SS
B


GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence SEFGEVFKMMQAEEAPKTPLQKSMDLLGKQLSFYSFGIIGIIMLVGWLLGKDILEMFTISVSLAVAAIPE
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Known secondary structure (DSSP)
TTTT







S
T
 .........290.........300.........310.........320.........330.........340.........350
Sequence GLPIVVTVTLALGVMRMVKKRAIVKKLPIVETLGCCNVICSDKTGTLTKNEMTVTHIFTSDGLHAEVTGV
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Known secondary structure (DSSP) TT

TGGG


TBTTTB



SSS



 .........360.........370.........380.........390.........400.........410.........420
Sequence GYNQFGEVIVDGDVVHGFYNPAVSRIVEAGCVCNDAVIRNNTLMGKPTEGALIALAMKMGLDGLQQDYIR
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Known secondary structure (DSSP) SSSS
S
TT
TTSS



TT
S
T
GGGGTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence KAEYPFSSEQKWMAVKCVHRTQQDRPEICFMKGAYEQVIKYCTTYQSKGQTLTLTQQQRDVYQQEKARMG
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Known secondary structure (DSSP)


TTT
SS
TTS


TT

 .........500.........510.........520.........530.........540.........550.........560
Sequence SAGLRVLALASGPELGQLTFLGLVGIIDPPRTGVKEAVTTLIASGVSIKMITGDSQETAVAIASRLGLYS
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Known secondary structure (DSSP) TTSTT


B
TTTT

SS
TSS
 .........570.........580.........590.........600.........610.........620.........630
Sequence KTSQSVSGEEIDAMDVQQLSQIVPKVAVFYRASPRHKMKIIKSLQKNGSVVAMTGDGVNDAVALKAADIG
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Known secondary structure (DSSP) SS
S
TTTS

TT



SGGGSS
 .........640.........650.........660.........670.........680.........690.........700
Sequence VAMGQTGTDVCKEAADMILVDDDFQTIMSAIEEGKGIYNNIKNFVRFQLSTSIAALTLISLATLMNFPNP
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Known secondary structure (DSSP) SSS


STT

STT


S
 .........710.........720.........730.........740.........750.........760.........770
Sequence LNAMQILWINIIMDGPPAQSLGVEPVDKDVIRKPPRNWKDSILTKNLILKILVSSIIIVCGTLFVFWREL
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Known secondary structure (DSSP) S
SS



STTTSS



SS


S
 .........780.........790.........800.........810.........820.........830.........840
Sequence RDNVITPRDTTMTFTCFVFFDMFNALSSRSQTKSVFEIGLCSNRMFCYAVLGSIMGQLLVIYFPPLQKVF
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Known secondary structure (DSSP) TTS


SSS
SSS

SSS

 .........850.........860.........870......
Sequence QTESLSILDLLFLLGLTSSVCIVAEIIKKVERSREK
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Known secondary structure (DSSP) T




T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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