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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7y82A_

Fold library idPDB HeaderMoleculeTitle
c7y82A_2.83PDB header: rna binding proteinChain: A: PDB Molecule: ramp superfamily protein;


Added to library: Sat Dec 17 09:12:00 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MNITVELTFFEPYRLVEWFDWDARKKSHSAMRGQAFAQWTWKGKGRTAGKSFITGTLVRSAVIKAVEELL
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Known secondary structure (DSSP)
SS




TT
GGGSSSSS

 .........80.........90.........100.........110.........120.........130.........140
Sequence SLNNGKWEGVPCCNGSFQTDESKGKKPSFLRKRHTLQWQANNKNICDKEEACPFCILLGRFDNAGKVHER
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Known secondary structure (DSSP) TTTTT








TTTS


SS


S






SS


SSS

TSSSS

SS


 .........150.........160.........170.........180.........190.........200.........210
Sequence NKDYDIHFSNFDLDHDLRLVDIASGRILNRVDFDTGKAKDYFRTWEADYETYGTYTGRITLRNEHAKKLL
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Known secondary structure (DSSP) GGG
S





B
TTT
S

S
GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence LASLGFVDKLCGALCRIEVIDHNDELRKQAEVIVEAFKQNDKLEKIRILADAIRTLRLHGEGVIEKDELP
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Known secondary structure (DSSP)

TT

TT

TTS
TS

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence DGKEERDKGHHLWDIKVQGTALRTKLKELWQSNKDIGWRKFTEMLGSNLYLIYKKETTEYYSSDLFIPVT
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Known secondary structure (DSSP)


TT
SS
STTTT
TTTTTS


B








 .........360.........370.........380.........390.........400.........410.........420
Sequence PPEGIETKEWIIVGRLKAATPFYFGVQQPSDSIPGKEVINEHTSFNILLDKENRYRIPRSALRGALRRDL
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Known secondary structure (DSSP)

SSS

SS
B



TTT

TT





SSSB
B
TT

B
 .........430.........440.........450.........460.........470.........480.........490
Sequence RTAFGSGCNVSLGGQILCNCKVCIEMRRITLKDSVSDFSEPPEIRYRIAKNPGTATVEDGSLFDIEVGPE
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Known secondary structure (DSSP) S





SS
SS






S




TTTTB
B
 .........500.........510.........520.........530.........540.........550.........560
Sequence GLTFPFVLRYRGHKFPEQLSSVIRYWEENDGKNGMAWLGGLDSTGKGRFALKDIKIFEWDLNQKINEYIK
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Known secondary structure (DSSP) T
SS

B
TTTS



SS
GGGT


TTTS
 .........570.........580.........590.........600.........610.........620.........630
Sequence ERGMRGKEKELLEMGESSLPDGLIPYKFFEERECLFPYKENLKPQWSEVQYTIEVGSPLLTADTISALTE
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Known secondary structure (DSSP) GGGTT
S
STTS
TT
TT


GGG
TTTT
S
B

B
TS
 .........640.........650.........660.........670.........680.........690.........700
Sequence PGNRDAIAYKKRVYNDGNNAIEPEPRFAVKSETHRGIFRTAVGRRTGDLGKEDHEDCTCDMCIIFGNEHE
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Known secondary structure (DSSP) TT

SB

BTTTT
SS

TGGG
S

TT




SSS
 .........710.........720.........730.........740.........750.........760.........770
Sequence SSKIRFEDLELINGNEFEKLEKHIDHVAIDRFTGGALDKAKFDTYPLAGSPKKPLKLKGRFWIKKGFSGD
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Known secondary structure (DSSP)

S



TTT
SS
B


SSSSS
B


SSS
TT

 .........780.........790.........800.........810.........820.........830.........840
Sequence HKLLITTALSDIRDGLYPLGSKGGVGYGWVAGISIDDNVINNDYVHPGHQSPKQDHKNKNIYYPHYFLDS
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Known secondary structure (DSSP) TTSS
SSS
GGGTTT

TT











TT



S

 .........850.........860.........870.........880.........890.........900.........910
Sequence GSKVYREKDIITHEEFTEELLSGKINCKLETLTPLIIPDTSDENGLKLQGNKPGHKNYKFFNINGELMIP
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Known secondary structure (DSSP)
S



BSS


SSS

SSSSS



TT
TBTTS
TTTSTT

TT
 .........920.........930.........940.........950.........960.........970.........980
Sequence GSELRGMLRTHFEALTKSCFAIFGEDSTLSWRMNADEKDYVRDKNRVFLNAANNNRQYLNNIKKSNHDLY
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Known secondary structure (DSSP) TT


SS

TT




S






 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence LQYLKGEKKIRFGYPVDDQIKKNYEDILDSYDGIKDQEVAERFDTFTRGSKLKVGDLVYFHIIDSLIPVR
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Known secondary structure (DSSP) TSS








T



S
S




SS

TT





SST
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence ISRKCASKTLGGKLDKALHPCTGLSDGLCPGCHLFGTTDYKGRVKFGFAKYENGPEWLITRGNNPERSLT
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Known secondary structure (DSSP) T

SS
S
GGGS


SSTT
B

BTTB

S

S

S


SSSSSTT
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence LGVLESPRPAFSIPDDESEIPGRKFYLHHNGWRIIRQKQLEIRETVQPERNVTTEVMDKGNVFSFDVRFE
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Known secondary structure (DSSP)







S
STTS







TTS
TTTS


TT
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence NLREWELGLLLQSLDPGKNIAHKLGKGKPYGFGSVKIKIDSLHTFKIKRVPQSDIREYINKGYQKLIEWS
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Known secondary structure (DSSP)
S

SSB

SS
GGGTTT




 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence GLPQWHVIPHIDKLYKLLWVPFLNDSKLEPDVRYPVLNEESKGYIEGSDYTYKKLGDKDNLPYKTRVKGL
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Known secondary structure (DSSP)



GGGSSB
TTTSS







BSSSSSTT

TT


BSTTTS
 .........1340.
Sequence TTPWSPWNPFQ
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Known secondary structure (DSSP) STT
BTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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