Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7y6tC_

Fold library idPDB HeaderMoleculeTitle
c7y6tC_4.20PDB header: viral proteinChain: C: PDB Molecule: spike glycoprotein;


Added to library: Sat Aug 6 08:53:22 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NFRRFFSKFNVQAPAVVVLGGYLPIGENQGVNSTWYCAGQHPTASGVHGIFVSHIRGGHGFEIGISQEPF
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)

TS


TT
S



SSSSS





STT


BSS

S

STT


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence DPSGYQLYLHKATNGNTNATARLRICQFPSIKTLGPTANNDVTIGRNCLFNKAIPAHMSEHSVVGITWDN
Predicted secondary structure




































SS confidence





































































Known secondary structure (DSSP)
SSS




GGG





SS
SS
S
SS
TTS
S



SS

T
 .........150.........160.........170.........180.........190.........200.........210
Sequence DRVTVFSDKIYYFYFKNDWSRVATKCYNSGGCAMQYVYEPTYYMLNVTSAGEDGISYQPCTANCIGYAAN
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) T
SSS










TT
SSS


SSTTSS




TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence VFATEPNGHIPEGFSFNNWFLLSNDSTLVHGKVVSNQPLLVNCLLAIPKIYGLGQFFSFNQTIDGVCNGA
Predicted secondary structure







































SS confidence





































































Known secondary structure (DSSP)




TTS


TT


SS




SS


SSTT


SSS


S

SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence AVQRAPEALRFNINDTSVILAEGSIVLHTALGTNFSFVCSNSSNPHLATFAIPLGATQVPYYCFFKVDTY
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP)





S
S
SSTTSTTS
S
S
TTTS






TT
S

SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence NSTVYKFLAVLPPTVREIVITKYGDVYVNGFGYLHLGLLDAVTINFTGHGTDDDVSGFWTIASTNFVDAL
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) S




S


TTTSS

S




SSS

SS
 .........430.........440.........450.........460.........470.........480.........490
Sequence IEVQGTAIQRILYCDDPVSQLKCSQVAFDLDDGFYPFSSRNLLSHEQPISFVTLPSFNAEGVTDVSFMTL
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP) TTS
STT
SS

S



SS

















B

S
 .........500.........510.........520.........530.........540.........550.........560
Sequence DVCTKYTIYGFKGEGIITLTNSSFLAGVYYTSDSGQLLAFKNVTSGAVYSVTPCSFSEQAAYVDDDIVGV
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) SS
TT




S
S
TTS

GGG


SS
TT
 .........570.........580.........590.........600.........610.........620.........630
Sequence ISSLSSSTFNSTRELPGFFYHSNDGSNCTEPVLVYSNIGVCKSGSIGYVPSQSGQVKIAPTVTGNISIPT
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP) SSS

SSSTTS

SB
SS
STT
TTS













SSS
 .........640.........650.........660.........670.........680.........690.........700
Sequence NFSMSIRTEYLQLYNTPVSVDCATYVCNGNSRCKQLLTQYTAACKTIESALQLSARLESVEVNSMLTISE
Predicted secondary structure










SS confidence





































































Known secondary structure (DSSP) S






TTT
TTTT



 .........710.........720.........730.........740.........750.........760.........770
Sequence EALQLATISSFNGDGYNFTNVLGVSVYDPARGRVVQKRSFIEDLLFNKVVTNGLGTVDEDYKRCSNGRSV
Predicted secondary structure














































SS confidence





































































Known secondary structure (DSSP) TSTTT


TT


TTTS
SGGG
STTSSGGG


S
SS
 .........780.........790.........800.........810.........820.........830.........840
Sequence ADLVCAQYYSGVMVLPGVVDAEKLHMYSASLIGGMVLGGFTAAAALPFSYAVQARLNYLALQTDVLQRNQ
Predicted secondary structure











SS confidence





































































Known secondary structure (DSSP)

TT


SS


SSSGGG


S

S


 .........850.........860.........870.........880.........890.........900.........910
Sequence QLLAESFNSAIGNITSAFESVKEASSQTSRGLNTVAHALTKVQEVVNSQGAALTQLTVQLQHNFQAISSS
Predicted secondary structure
SS confidence





































































Known secondary structure (DSSP) SSSSSS
TTS
STTSGGGS

SSS
S
 .........920.........930.........940.........950.........960.........970.........980
Sequence IDDIYSRLDPPSADVQVDRLITGRLSALNAFVAQTLTKYTEVQASRKLAQQKVNECVKSQSQRYGFCGGD
Predicted secondary structure








SS confidence





































































Known secondary structure (DSSP) S
TTSS

SSTTTTTSS
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence GEHIFSLVQAAPQGLLFLHTVLVPSDFVDVIAIAGLCVNDEIALTLREPGLVLFTHELQNHTATEYFVSS
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP) STT
S


TTTS
TT
SGGGTSS


 .........1060.........1070.........1080.........1090........
Sequence RRMFEPRKPTVSDFVQIESCVVTYVNLTRDQLPDVIPDYIDVNKTRDE
Predicted secondary structure



























SS confidence















































Known secondary structure (DSSP) SSS






STTSS

TTS
TT
TT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D