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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7y38X_

Fold library idPDB HeaderMoleculeTitle
c7y38X_2.80PDB header: viral protein/rnaChain: X: PDB Molecule: rna-directed rna polymerase nsp4;


Added to library: Sat Dec 17 09:04:00 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YIFSSDTGQGHLQQKSVRQTTLPVNIVEEVHEEKCYPPKLDEIKEQLLLKRLQESASTANRSRYQSRKVE
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Known secondary structure (DSSP)
TT

TTS

SS
S


SSSSS












S

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence NMKAMIIHRLKEGCRLYLASDTPRVPSYRITYPAPIYSPSINIKLSNPETAVAVCNEFLARNYPTVASYQ
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Known secondary structure (DSSP) TTTT
B













B




S

TTGGG

 .........150.........160.........170.........180.........190.........200.........210
Sequence VTDEYDAYLDMVDGSESCLDRATFNPSKLRSYPKQHSYHAPTIRSAVPSPFQNTLQNVLAAATKRNCNVT
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Known secondary structure (DSSP) SS


S





SS

GGG








SS










T







 .........220.........230.........240.........250.........260.........270.........280
Sequence QMRELPTMDSAAFNVECFKKYACNQEYWREFASSPIRVTTENLTTYVTKLKGPKAAALFAKTHNLLPLQE
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Known secondary structure (DSSP)
SSSSB
SSSS
B

BT

TT
SS


GGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence VPMDRFTMDMKRDVKVTPGTKHTEERPKVQVIQAAEPLATAYLCGIHRELVRRLNAVLLPNVHTLFDMSA
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Known secondary structure (DSSP) S
SS







SSS
TTTS







TTSTTSB
TT
TT

 .........360.........370.........380.........390.........400.........410.........420
Sequence EDFDAIIATHFKPGDAVLETDIASFDKSQDDSLALTAMMLLEDLGVDQPILDLIEAAFGEISSCHLPTGT
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Known secondary structure (DSSP) TTTT

TT


S

TTS
TTB
GGGS
TTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence RFKFGAMMKSGMFLTLFVNTLLNITIASRVLEERLTTSACAAFIGDDNIIHGVVSDALMAARCATWMNME
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Known secondary structure (DSSP)
S
S

SSS
SGGGTTS
S
TTT



TTT
S
S
 .........500.........510.........520.........530.........540.........550.........560
Sequence VKIIDAVVSVKAPYFCGGFILHDTVTGTACRVADPLKRLFKLGKPLAAGDEQDEDRRRALADEVTRWQRT
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Known secondary structure (DSSP)
TTTB

B
SS
SSS


TTS

BTT


TTTBT
 .........570.........580.........590.........600.........610.
Sequence GLVTELERAVYSRYEVQGITAVITSMATFASSKENFKKLRGPVVTLYGGPK
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Known secondary structure (DSSP) T





TT
TGGGGGG


S




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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