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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7y1cY_

Fold library idPDB HeaderMoleculeTitle
c7y1cY_3.13PDB header: virusChain: Y: PDB Molecule: phage tail tubular protein b;


Added to library: Sat Jun 17 13:21:05 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ALVSQSIKNLKGGISQQPEILRYPEQGTLQVNGWSSETEGLQKRPPMVFIKSLGPRGYLGEDPYIHLINR
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Known secondary structure (DSSP)







S
TTTS
SSSS

SSSS


TTTT
SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence DEYEQYYAVFTGNDVRVFDLSGYEYQVRGDRSYVTVNNPKDNLRMVTVADYTFIVNRTRQVRENQNRTNG
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Known secondary structure (DSSP)
SS

SS
TTS




TTT

S

SS
TT
B



S
BSST
 .........150.........160.........170.........180.........190.........200.........210
Sequence GTFRDNVDAIINVRGGQYGRKLEVNINGVWVSHQLPPGDNAKEDPPKVDAQAIAEAIATLLRTAHPTWTF
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Known secondary structure (DSSP) T


TTT



TT
SSS




TT
SSS

TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence NVGTGFIHCIAPADTTIDILETKDGYADQLINPVTHYVQSFSKLPLNAPDGYMVKIVGDTSKTADQYYVK
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Known secondary structure (DSSP)
SS

SS



S

SSSS
SSSSSGGGS
S

SSS



SSSS


 .........290.........300.........310.........320.........330.........340.........350
Sequence YDKSQKVWKETVGWNISVGLEYHTMPWTLVRAADGNFDLGYHEWKDRRAGDDDTNPQPSFVNSTITDVFF
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Known secondary structure (DSSP) TTTT


SSSB
S

SSSS

TTTTS







S

TTTS


TTTTSB
 .........360.........370.........380.........390.........400.........410.........420
Sequence FRNRLGFISGENIVMSRTSKYFEFYPPSVANYTDDDPLDVAVSHNRVSVLKYAVSFAEELLLWSDEAQFV
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Known secondary structure (DSSP) SSSS
SS

BTTBTT

S
S
SSS

SSS


S
SS


TTSS


B
 .........430.........440.........450.........460.........470.........480.........490
Sequence LSANGVLSAKTAQLDLTTQFDVSDRARPYGIGRNIYYASPRSSFTSIMRYYAVQDVSSVKNAEDMTAHVP
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Known secondary structure (DSSP) B
BSSS

TTTB

B







SSS

SSS

SSS
SSSSS
S
SS
S
 .........500.........510.........520.........530.........540.........550.........560
Sequence NYIPNGVYSINGSGTENFACVLTKGAPSKVFIYKFLYMDENIRQQSWSHWDFGDGVEVMAANCINSTMYM
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Known secondary structure (DSSP) TTS
S
TTTTSSSSS
TT


SS
TT
 .........570.........580.........590.........600.........610.........620.........630
Sequence LMRNGYNVWIAAVDFKKESTDFPFEPYRFHVDAKRSYHISETAYDIETNQTVVNVKDIYGASFAKGTVAI
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Known secondary structure (DSSP)
SS


SS

SSSSSSS






TT

BTTTTB

SS


S

 .........640.........650.........660.........670.........680.........690.........700
Sequence CESDGKITEYEPTGNSWDSTPDIRISGDVSGKNIVIGFLYDFQYVFSRFLIKQEQNDGTTSTEDSGRLQL
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Known secondary structure (DSSP)
TTS



SSS




S


S













SSS



SS

 .........710.........720.........730.........740.........750.........760.........770
Sequence RRAWVNYQNTGAFTVSVDNGSREFNYLVNARVGSTGLRLGQKATTTGQYRFPVTGNALYQKVSLSSFNAS
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Known secondary structure (DSSP) SS

S

SS




TT
SS

SSS




TTT


SSS
 .........780.........790
Sequence PVSIIGCGWEGNYSRRANGI
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Known secondary structure (DSSP)




SS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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