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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7xq8C_

Fold library idPDB HeaderMoleculeTitle
c7xq8C_3.30PDB header: signaling proteinChain: C: PDB Molecule: chimera of heavy chain of vrc01 antibody fab and isoform 2


Added to library: Sat Aug 20 09:20:48 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QVQLVQSGGQMKKPGESMRISCRASGYEFIDCTLNWIRLAPGKRPEWMGWLKPRGGAVNYARPLQGRVTM
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TT

SS
TTTS

TTS


TTTT

STTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence TRDVYSDTAFLELRSLTVDDTAVYFCTRGKNCDYNWDFEHWGRGTPVIVSSGSASAPTLFPLVSCENSPS
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Known secondary structure (DSSP) TTTT
S

GGG
STT


S
S

S



S


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence DTSSVAVGCLAQDFLPDSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMQGTDEHVVCK
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SS


TTS
B
S



TT
S
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence VQHPNGNKEKNVPLPVIAELPPKVSVFVPPRDGFFGNPRKSKLICQATGFSPRQIQVSWLREGKQVGSGV
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TT













TT

BTTTT


SS

TT

SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence TTDQVQAEAKESGPTTYKVTSTLTIKESDWLGQSMFTCRVDHRGLTFQQNASSMCVPDQDTAIRVFAIPP
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SSSS

TTT

TT
S



S

SS



 .........360.........370.........380.........390.........400.........410.........420
Sequence SFASIFLTKSTKLTCLVTDLTTYDSVTISWTRQNGEAVKTHTNISESHPNATFSAVGEASICEDDWNSGE
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SSS

SS

TTS



S
TTSS
T
 .........430.........440.........450.........460.........470.........480.........490
Sequence RFTCTVTHTDLPSPLKQTISRPKGVALHRPDVYLLPPAREQLNLRESATITCLVTGFSPADVFVQWMQRG
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TT
SS














TTSS
SSS

SSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence QPLSPEKYVTSAPMPEPQAPGRYFAHSILTVSEEEWNTGETYTCVVAHEALPNRVTERTVDKSTEGEVSA
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Known secondary structure (DSSP) SB

TTS



SSSTT


SSTTTT



TTSTTS

SSS




 .........570.........580.........590.....
Sequence DEEGFENLWATASTFIVLFLLSLFYSTTVTLFKVK
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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