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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7xofB_

Fold library idPDB HeaderMoleculeTitle
c7xofB_2.56PDB header: ligaseChain: B: PDB Molecule: glycine--trna ligase;


Added to library: Sat May 27 09:43:59 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SVLTFQQAIQRLQDYWASVGCAVMQCSNTEVGAGTMNPLTFLRVLGPEPWNVAYVEPSIRPDDSRYGDNP
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Known secondary structure (DSSP)



TT




SS
BSSGGGSTTTSSS


GGG

TT
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence NRLQRHTQFQVILKPDPGNSQDLFLHSLSALGINVREHDIRFVEDNWESPVLGAWGLGWEVWMDGMEITQ
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Known secondary structure (DSSP) S

SS

S
TT

TTTS



TTTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence FTYFQQSGSLPLLPVSVEITYGLERILMSLQGVDHFKNIQYTKGITYGELFLENEKEMSAYYLEHANVDN
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Known secondary structure (DSSP) TTT
SSGGG
TTTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence IQKHFDDFEEEARSLLSLWLPIPAYDHVLKASHAFNILDSRGFVGVTERARYFGRMRSLARQCAQLWVKT
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Known secondary structure (DSSP) TT
TT


TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence RENLGYPLGTYQEKGVVGQPRAFVLEIGTEELPPHDVIEATKQLEKSLIQILEKRRLSHGKVRSYGTPRR
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Known secondary structure (DSSP) TT
TT











S


TT


S
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence LAVVVENLNMKQMEARFADEVLTEDLPTIISGISFPKSMRWNSNIVFSRPIRWIFALHGDLIVPFCFAGI
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Known secondary structure (DSSP)
SB




B


SS
B
SSSS

BSS
TT


TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence SSGNQSCGLRNSSLANFKVEAAELYLHTLEKAGILIDMQERKQRILHDSSILAEGVGGDIIAPDSLVQEV
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Known secondary structure (DSSP) S
STTSTTS
SSGGGTT



TTT


 .........500.........510.........520.........530.........540.........550.........560
Sequence INLVEAPMPIIGRYDVSFLALPKDVLITVMQKHQKYFPVTSKTMGNLLPCFITVANGAIKEEVVRKGNEA
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Known secondary structure (DSSP) TT
SS

GGGGGS


TTT
SSS

 .........570.........580.........590.........600.........610.........620.........630
Sequence VLRARYEDAKFFYKMDTQKKLSEFRDQLSSILFHERLGTMLDKMKRVENTVAEVALLLGINEKMIPAIKD
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Known secondary structure (DSSP) TS
GGGGGSTTTTT

TTT
 .........640.........650.........660.........670.........680.........690.........700
Sequence AAALAMSDLATNIVTEFTSLAGIMARHYALRDGLSEQIAEALFEITLPRFSGDVFPKTDPGIVLAVTDRL
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Known secondary structure (DSSP) TTTTGGGGS
GGGTTTTT

TT


STT




S
 .........710.........720.........730.........740.........750.........760.........770
Sequence DSLVGLFGAGCQPSSTNDPFGLRRISYGLVQILVENKKNFDLTKALTLVAEEQPITIDSGVIDEVVQFVT
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Known secondary structure (DSSP) TT



SS

TT
TT



T
SS


 .........780.........790.........800.........810.........820.........830.........840
Sequence RRLEQLLVDEGINCEIVRSVLIERANCPYLASQTAIEMEAFSRTEDFPKIVEAYSRPTRIIRGKEIGSAL
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Known secondary structure (DSSP) TT

TTSTTSSTT
TS
 .........850.........860.........870.........880.........890.........900.........910
Sequence EVDASVFEKDEERALWSAYLEVADKIHPGVDIKAFADASLELLQPLEDFFTNVFVMAEDEKVRNNRLALL
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Known secondary structure (DSSP)


GGG

SS

TT

GGG

TT
SS
 .........920.......
Sequence TKVASLPKGIADLSVLP
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Known secondary structure (DSSP) TTTTT

TTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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