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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7xodA_

Fold library idPDB HeaderMoleculeTitle
c7xodA_3.27PDB header: viral protein/immune systemChain: A: PDB Molecule: spike glycoprotein;


Added to library: 3.27
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVDNPVLPFNDGVYFASTEKSNIIRGWI
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Known secondary structure (DSSP)
SS


SS




S

TT


SS






SS
SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence FGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLDFRVYSSANNCTFEYVSQPFLKNLREFVFKNIDG
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Known secondary structure (DSSP) SSSSTTS

SS





B
SS

B



SBS






S



TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence YFKIYSKHTPIDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPR
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Known secondary structure (DSSP)



S









B
S


SSTT

S
S






 .........220.........230.........240.........250.........260.........270.........280
Sequence TFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFDEVFN
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Known secondary structure (DSSP)
TTS
TTT
TSS


S









B
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence ATRFASVYAWNRKRISNCVADYSVLYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIAPG
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Known secondary structure (DSSP)
S



STT

SSB

TTTTT
STT

SS
TT


S
TTTTTT
STT
 .........360.........370.........380.........390.........400.........410.........420
Sequence QTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCNGV
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Known secondary structure (DSSP)

ST
B

TT




SS

TTSS

S



BT










SSS

SSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence AGFNCYFPLRSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLT
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Known secondary structure (DSSP)

S



S



TTS
GGGS

SS




B





B


SSSS

 .........500.........510.........520.........530.........540.........550.........560
Sequence ESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQGVNCTEVSNV
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Known secondary structure (DSSP)





TT


GGG

TTT






TTT
S

T

GGG


 .........570.........580.........590.........600.........610.........620.........630
Sequence FQTRAGCLIGAEYVNNSYECDIPIGAGICASYQTQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTE
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Known secondary structure (DSSP) TTS

SS



STT















TT
 .........640.........650.........660.........670.........680.........690.........700
Sequence ILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLKRALTGIAVEQDKNTQEVFAQVKQIYKTPPIK
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Known secondary structure (DSSP)





TTT
GGG
STT
SS




SS
 .........710.........720.........730.........740.........750.........760.........770
Sequence YFGGFNFSQILPDPSKPSKRSPIEDLLFNKVTLKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGA
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Known secondary structure (DSSP)
BTTB

TTTS

TTSSS


S


BTT


SS
TT
 .........780.........790.........800.........810.........820.........830.........840
Sequence GPALQIPFPMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTPSALGKLQDVVNHNAQALN
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Known secondary structure (DSSP) SS




TT

TS
GGGG
 .........850.........860.........870.........880.........890.........900.........910
Sequence TLVKQLSSKFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANc7xodA_
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Known secondary structure (DSSP) GGG

TTSS
S
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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