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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7xo8B_

Fold library idPDB HeaderMoleculeTitle
c7xo8B_3.48PDB header: viral protein/hydrolaseChain: B: PDB Molecule: spike glycoprotein;


Added to library: 3.48
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVDNPVLPFNDGVYFASTEKSNIIRGWI
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Known secondary structure (DSSP)

SS





SS


SS

TT
S









SS


SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence FGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLDFRVYSSANNCTFEYVSQPFLKNLREFVFKNIDG
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Known secondary structure (DSSP) SSS
TT

SS
S


SS





S
SSS

B









TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence YFKIYSKHTPIDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPR
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Known secondary structure (DSSP)




S














SS



SS





S
S





 .........220.........230.........240.........250.........260.........270.........280
Sequence TFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFDEVFN
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Known secondary structure (DSSP)
TTS

SSS
T
SS

S



B


S







S


S
 .........290.........300.........310.........320.........330.........340.........350
Sequence ATRFASVYAWNRKRISNCVADYSVLYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIAPG
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Known secondary structure (DSSP)
SS


STT



SS




GGGS
SS
SSS
TTGGGG

BSB

GGGGGGSSSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence QTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCNGV
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Known secondary structure (DSSP)

ST



TT


TTTS

TT
BTT



SS


TT








SSS
TTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence AGFNCYFPLRSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLT
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Known secondary structure (DSSP)
BTT
S

B
TTS
TTTS
B

SS


B










SS
TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence ESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQGVNCTEVSNV
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Known secondary structure (DSSP)





TT



B
TTS
B

SSS



SB


TTT



TS
TT




 .........570.........580.........590.........600.........610.........620.........630
Sequence FQTRAGCLIGAEYVNNSYECDIPIGAGICASYQTQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTE
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Known secondary structure (DSSP)
SSS

SS





SSS















TT


 .........640.........650.........660.........670.........680.........690.........700
Sequence ILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLKRALTGIAVEQDKNTQEVFAQVKQIYKTPPIK
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Known secondary structure (DSSP)





S
S
TTS
SSTTSSSS

SS




SS
 .........710.........720.........730.........740.........750.........760.........770
Sequence YFGGFNFSQILPDPSKPSKRSPIEDLLFNKVTLKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGA
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Known secondary structure (DSSP)
SSS


TTTS

SSSSS


TT




SS


SS
TTTTTGGGS
 .........780.........790.........800.........810.........820.........830.........840
Sequence GPALQIPFPMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTPSALGKLQDVVNHNAQALN
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Known secondary structure (DSSP) SS




T

TS
TTTT
 .........850.........860.........870.........880.........890.........900.........910
Sequence TLVKQLSSKFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATc7x
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Known secondary structure (DSSP) TTTS
TTSS
SSS
GGGS
 ....
Sequence o8B_
Predicted secondary structure
SS confidence



Known secondary structure (DSSP) TS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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