Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7xjyB_

Fold library idPDB HeaderMoleculeTitle
c7xjyB_3.60PDB header: ligase/rnaChain: B: PDB Molecule: glycine--trna ligase;


Added to library: Sat May 6 09:00:31 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SVLTFQQAIQRLQDYWASVGCAVMQCSNTEVGAGTMNPLTFLRVLGPEPWNVAYVEPSIRPDDSRYGDNP
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)



T




SS
BSSGGGSTTTTTTTSSS


GGG

TT
ST
 .........80.........90.........100.........110.........120.........130.........140
Sequence NRLQRHTQFQVILKPDPGNSQDLFLHSLSALGINVREHDIRFVEDNWESPVLGAWGLGWEVWMDGMEITQ
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP) T

SS

S
TT

TTTS


TTTTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence FTYFQQSGSLPLLPVSVEITYGLERILMSLQGVDHFKNIQYTKGITYGELFLENEKEMSAYYLEHANVDN
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) BTTB

SS

T
SSGGGSTTTT

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence IQKHFDDFEEEARSLLSLWLPIPAYDHVLKASHAFNILDSRGFVGVTERARYFGRMRSLARQCAQLWVKT
Predicted secondary structure









SS confidence





































































Known secondary structure (DSSP) TT
TT
S
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence RENLGYPLGTYQEPRAFVLEIGTEELPPHDVIEATKQLEKSLIQILEKRRLSHGKVRSYGTPRRLAVVVE
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP) TT
TT





S


TT




TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence NLNADEVLTEDLPTIISGISFPKSMRWNSNIVFSRPIRWIFALHGDLIVPFCFAGISSGNQSCGLRNSSL
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP)




SS
B
SSTT

BSS
TT


TT
BS
STTSTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence ANFKVEAAELYLHTLEKAGILIDMQERKQRILHDSSILAEGVGGDIIAPDSLVQEVINLVEAPMPIIGRY
Predicted secondary structure


















SS confidence





































































Known secondary structure (DSSP) S
S
GGGT


SSSTTT



SS

 .........500.........510.........520.........530.........540.........550.........560
Sequence DVSFLALPKDVLITVMQKHQKYFPVTSKTMGNLLPCFITVANGAIKEEVVRKGNEAVLRARYEDAKFFYK
Predicted secondary structure


















SS confidence





































































Known secondary structure (DSSP)
GGGGGS
TT

TTTT
SS

 .........570.........580.........590.........600.........610.........620.........630
Sequence MDTQKKLSEFRDQLSSILFHERLGTMLDKMKRVENTVAEVALLLGINEKMIPAIKDAAALAMSDLATNIV
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP) SSS
TTGGGGGGGGSTTTTTTT

GGGTTTTTTTTS
 .........640.........650.........660.........670.........680.........690.........700
Sequence TEFTSLAGIMARHYALRDGLSEQIAEALFEITLPRFSGDVFPKTDPGIVLAVTDRLDSLVGLFGAGCQPS
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)
GGGTTT

TS

SSTT




S



S
 .........710.........720.........730.........740.........750.........760...
Sequence STNDPFGLRRISYGLVQILVENKKNFDLTKALTLVAEEQPITIDSGVIDEVVQFVTRRLEQLL
Predicted secondary structure















SS confidence






























































Known secondary structure (DSSP) TTS
SS
STT




SS




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D