Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7xjgJ_

Fold library idPDB HeaderMoleculeTitle
c7xjgJ_2.51PDB header: rna binding protein/dna/rnaChain: J: PDB Molecule: retron st85 family effector protein;


Added to library: Sat Sep 17 08:23:08 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MNKKFTDEQQQQLIGHLTKKGFYRGANIKITIFLCGGDVANHQSWRHQLSQFLAKFSDVDIFYPEDLFDD
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP)





TTTSSSTTTB
S




S
SS
TTSSSSSS
TTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LLAGQGQHSLLSLENILAEAVDVIILFPESPGSFTELGAFSNNENLRRKLICIQDAKFKSKRSFINYGPV
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) TTS
SS


S



SSSSSSTTTT
GGGSSSS
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence RLLRKFNSKSVLRCSSNELKEMCDSSIDVARKLRLYKKLMASIKKVRKENKVSKDIGNILYAERFLLPCI
Predicted secondary structure


















SS confidence





































































Known secondary structure (DSSP)
STT

TTT

SS





STT
TT
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence YLLDSVNYRTLCELAFKAIKQDDVLSKIIVRSVVSRLINERKILQMTDGYQVTALGASYVRSVFDRKTLD
Predicted secondary structure












SS confidence





































































Known secondary structure (DSSP) SS
B
S
S
SGGGTTSTT
B
 .........290.........300......
Sequence RLRLEIMNFENRRKSTFNYDKIPYAH
Predicted secondary structure










SS confidence

























Known secondary structure (DSSP) STT



TT






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D