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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7wwmC_

Fold library idPDB HeaderMoleculeTitle
c7wwmC_2.80PDB header: viral proteinChain: C: PDB Molecule: spike glycoprotein;


Added to library: Wed Jun 22 00:38:32 c7wwmC_
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHANPVLPFNDGVYFASTEKSNIIRGWIFGTT
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Known secondary structure (DSSP)

SS


B

SSS


S



SS






SS

BB
SS

B


BSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LDSKTQSLLIVNNATNVVIKVCEFQFCNDPFVYSSANNCTFEYVSKNLREFVFKNIDGYFKIYSKHTPIN
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Known secondary structure (DSSP) SSSSS

SS



SS



S





TT

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence LVRDLPQGFSALEPLVDLPIGINITRFQTLLAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKC
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Known secondary structure (DSSP) SSSS






B




S


B



SSS
TTSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence TLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNS
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Known secondary structure (DSSP) TSS


S





S


SS



GGGTTS
S



STT


S
B


TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence ASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNL
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Known secondary structure (DSSP)


SSSS
TTTGGG


S
GGGSTTSSTT

STTTTTT



TT

S
TTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence DSKVGGNYNYRYRLFRKSNLKPFERDISTEIYQAGSKPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVV
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Known secondary structure (DSSP) S

TT







SS


TT







B

SSS

SS

SSS
B





SSS
TTSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence VLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQT
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Known secondary structure (DSSP)
SS
SB

B
S


SS


SS
TB





TT


TTT
TTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence LEILDITPCSFGGVSVITPGTNTSNQVAVLYQGVNCTEVPSNVFQTRAGCLIGAEHVNNSYECDIPIGAG
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Known secondary structure (DSSP)






S
TTT



T

TTS



TTS

S




STT
 .........570.........580.........590.........600.........610.........620.........630
Sequence ICASYQTQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNL
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Known secondary structure (DSSP) S
















TT




TSS
 .........640.........650.........660.........670.........680.........690.........700
Sequence LLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPSKPSKRSPIEDLL
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Known secondary structure (DSSP) GGG
S


SS




SS

STT


TTTS

TTSSSS

 .........710.........720.........730.........740.........750.........760.........770
Sequence FNKVKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGPALQIPFPMQMAYRFNGIGVTQNVLYEN
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Known secondary structure (DSSP)


SS

SS
TTSTTTSS




TTT

TTT
 .........780.........790.........800.........810.........820.........830.........840
Sequence QKLIANQFNSAIGKIQDSLSALGKLQNVVNQNAQALNTLVKQLSSNFGAISSVLNDILSRLDPPEAEVQI
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Known secondary structure (DSSP)


GGG

SSSS
SSTTTS
 .........850.........860.........870.........880.........890.........900.........910
Sequence DRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFL
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Known secondary structure (DSSP) TSS


STTTTSSSTT
 .........920.........930.........940.........950.........960.........970.........980
Sequence HVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIV
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Known secondary structure (DSSP) S
TTSSSSSS

TTS


B

BTTS
S
TTSSTT
 .........990...
Sequence NNTVYDPLQPELD
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Known secondary structure (DSSP)


B
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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