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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7wvpD_

Fold library idPDB HeaderMoleculeTitle
c7wvpD_3.70PDB header: viral proteinChain: D: PDB Molecule: spike glycoprotein;


Added to library: 3.70
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHVIKRFDNPVLPFNDGVY
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Known secondary structure (DSSP)




TT





SS


B

SS



S


TT







SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence FASIEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLDMESEFRVYSSANNCTFEYV
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Known secondary structure (DSSP) SS

SSSSTTS

SSS


B
SS








BS


S

 .........150.........160.........170.........180.........190.........200.........210
Sequence SQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPIDLPQGFSALEPLVDLPIGINITRFQTLLALH
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S




BTT





S


B






B
 .........220.........230.........240.........250.........260.........270.........280
Sequence RSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQP
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Known secondary structure (DSSP)


SS
B





B
SS

B



BTTT
T
S


S


 .........290.........300.........310.........320.........330.........340.........350
Sequence TESIVRFPNITNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNLAPFFTFKCYGVSPTKLNDLCF
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S
SB

TS
S

B
SSS



SSB


TTTTTT

SS

SSS
SSSSSS

B
 .........360.........370.........380.........390.........400.........410.........420
Sequence TNVYADSFVIRGDEVRQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLK
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Known secondary structure (DSSP) S


SGGGSS
STT

SSSTTTT



TT

S
TTTT

TT


SS


SS


 .........430.........440.........450.........460.........470.........480.........490
Sequence PFERDISTEIYQAGNKPCNGVAGFNCYFPLRSYSFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTN
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Known secondary structure (DSSP) TT








SS


TTS
BTT





TTS
GGG



SS


B







 .........500.........510.........520.........530.........540.........550.........560
Sequence LVKNKCVNFNFNGLKGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGT
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Known secondary structure (DSSP)


SS

SS


S


TT
S
TTSS

SSS







T
 .........570.........580.........590.........600.........610.........620.........630
Sequence NTSNQVAVLYQGVNCTEVPNVFQTRAGCLIGAEYVNNSYECDIPIGAGICASYQTSQSIIAYTMSLGAEN
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Known secondary structure (DSSP) TT



T

TTS



SS
S

S




STT









 .........640.........650.........660.........670.........680.........690.........700
Sequence SVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLKRALTGIAVE
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Known secondary structure (DSSP)




SS







SSSS
SSTTTTTGGG
S
 .........710.........720.........730.........740.........750.........760.........770
Sequence QDKNTQEVFAQVKQIYKTPPIKYFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTKFKGLTVLPPLLTDEM
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Known secondary structure (DSSP) T
S
S





S


SSS


TTTS

SSSSS






SS


SS
 .........780.........790.........800.........810.........820.........830.........840
Sequence IAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLS
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Known secondary structure (DSSP) T
SSTTSSS




TTT

TTT
 .........850........
Sequence STASALGKLQDc7wvpD_
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Known secondary structure (DSSP)
GGGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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