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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7wvpC_

Fold library idPDB HeaderMoleculeTitle
c7wvpC_3.70PDB header: viral proteinChain: C: PDB Molecule: spike glycoprotein;


Added to library: Wed Jun 22 01:58:54 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHVIKRFDNPVLPFNDGVY
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Known secondary structure (DSSP)




SSB





SS



SS



S


TT


B




SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence FASIEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLDMESEFRVYSSANNCTFEYV
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Known secondary structure (DSSP) SS



SSSSTTS

SS





SS

B






S
S


S


 .........150.........160.........170.........180.........190.........200.........210
Sequence SQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPIDLPQGFSALEPLVDLPIGINITRFQTLLALH
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S


SS

TT





S









B
 .........220.........230.........240.........250.........260.........270.........280
Sequence RSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQP
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Known secondary structure (DSSP)

TTT






SSS
TTT
TTTSS


S




 .........290.........300.........310.........320.........330.........340.........350
Sequence TESIVRFPNITNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNLAPFFTFKCYGVSPTKLNDLCF
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SB


TTTTS
SS


SSS

S


TS

SSSSS
GGGTTTS
B
 .........360.........370.........380.........390.........400.........410.........420
Sequence TNVYADSFVIRGDEVRQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLK
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Known secondary structure (DSSP) S
TTSSTT
SSS

SST



TT

S
B
TTTS

TT

TT



SS


 .........430.........440.........450.........460.........470.........480.........490
Sequence PFERDISTEIYQAGNKPCNGVAGFNCYFPLRSYSFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTN
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Known secondary structure (DSSP) TT








SSS

TTS
BTT





TTS
STT


B

SSSS


S




 .........500.........510.........520.........530.........540.........550.........560
Sequence LVKNKCVNFNFNGLKGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGT
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Known secondary structure (DSSP)


SS
TT

S


TT


TTSS
SSS








T
 .........570.........580.........590.........600.........610.........620.........630
Sequence NTSNQVAVLYQGVNCTEVPTWRVYSTGSNVFQTRAGCLIGAEYVNNSYECDIPIGAGICASYQTSQSIIA
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Known secondary structure (DSSP) TT



S

TT





GGGS
S


SS
S

S




STT


 .........640.........650.........660.........670.........680.........690.........700
Sequence YTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLK
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TT







SSS
TTSSSS
S
 .........710.........720.........730.........740.........750.........760.........770
Sequence RALTGIAVEQDKNTQEVFAQVKQIYKTPPIKYFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTKFKGLTV
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Known secondary structure (DSSP) T
S
SS




S


SSS


TTTS

SSSSS


TTTTT



SS
 .........780.........790.........800.........810.........820.........830.........840
Sequence LPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSA
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Known secondary structure (DSSP)


SS
T
SSTTTSS




SGGGT

TTT
 .........850.........860.........870.........880.........890.........900.........910
Sequence IGKIQDSLSSTASALGKLQDVVNHNAQALNTLVKQLSSKFGAISSVLNDIFSRLDPPEAEVQIDRLITGR
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Known secondary structure (DSSP)
SGGGTSSS
TTSS
S
S
 .........920.........930.........940.........950.........960.........970.........980
Sequence LQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPA
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Known secondary structure (DSSP) TTSS


STTSSSSSTT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence QEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDP
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Known secondary structure (DSSP) S
SSSSSSSSS

SSS


B

BSSSSSS
SS



B
T
 .......
Sequence LQPELDS
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Known secondary structure (DSSP) TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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