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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7wug5_

Fold library idPDB HeaderMoleculeTitle
c7wug5_3.30PDB header: ligaseChain: 5: PDB Molecule: vacuolar import and degradation protein 28;


Added to library: Wed Jun 22 00:24:54 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AYSLENLKKISNSLVGDQLAKVDYFLAPKCQIFQCLLSIEQSDGVELKNAKLDLLYTLLHLEPQQRDIVG
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Known secondary structure (DSSP)


TSS
SSTTTT


TTS
T



 .........80.........90.........100.........110.........120.........130.........140
Sequence TYYFDIVSAIYKSMSLASSFTKNNSSTNYKYIKLLNLCAGVYPNCGFPDLQYLQNGFIQLVNHKFLRSKC
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Known secondary structure (DSSP) T

TTTTTTTS


SS

S
TTTTT

 .........150.........160.........170.........180.........190.........200.........210
Sequence KIDEVVTIIELLKLFLLVDEHYQDFKMAESLEHIIVKISSKYLDQISLKYIVRLPFDNKGVDCTRAIPKK
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Known secondary structure (DSSP)
T



TTSGGG










S
TT
TTSS




 .........220.........230.........240.........250.........260.........270.........280
Sequence INISNMYDSSLLSLALLLYLRYHYMIKLRNDATFKMFVLGLLKSNDVNIRCVALKFLLQPYFTEDKKWED
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Known secondary structure (DSSP)




TTT

TTT
TT
S
TSSTT
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence TRTLEKILPYLVKSFNYDPLPWWFDPFDMLDSLIVLYNEITPMNNPVLTTLAHTNVIFCILSRFAQCLSL
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Known secondary structure (DSSP) TT
SS

TT


TT

TTTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence PQHNEATLKTTTKFIKICASFAASDEKYRLLLLNDTLLLNHLEYGLESHITLIQDFISLKDEIKMCLPPI
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Known secondary structure (DSSP) SS

SSS
TSSST






 .........430.........440.........450.........460.........470.........480.........490
Sequence YDHDFVAAWLLLLKSFSRSVSALRTTLKRNKIAQLLLQILSKTYTLTKECYFAGQDFMKPEIMIMGITLG
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Known secondary structure (DSSP) TTTSTTS


GGG
 .........500.........510.........520.........530.........540.........550.........560
Sequence SICNFVVEFSNLQSFMLRNGIIDIIEKMLTDPLFNSKKAWDDNEDERRIALQGIPVHEVKANSLWVLRHL
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Known secondary structure (DSSP) TSTTSTTTTTSTTT
TTS


TT
TT


 .........570.........580.........590.........600.........610.........620.........630
Sequence MYNCQNEEKFQLLAKIPMNLILDFINDPCWAVQAQCFQLLRNLTCNSRKIVNILLEKFKTYLFEFLAKKM
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Known secondary structure (DSSP) TSS

S
GGG
SSTT
T


 .........640.........650.........660.........670.........680.........690.........700
Sequence RLLNPLDTQQKKAMEGILYIIVNLAAVNENKKQLVIEQDEILNIMSEILVETTTDSSSYGNDSNLKLACL
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Known secondary structure (DSSP) TTS
TTSSSS

ST

SS
TTSS


 .........710.........720.........730.........740.........750.........760.........770
Sequence WVLNNLLWNSSVSHYTQYAGDEFVRTPAAKSNVQVTRATVERCRKLVEVGLYDLVRKNITDESLSVREKA
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Known secondary structure (DSSP) S





S



TTT

TT
SS
 .........780..
Sequence RTLLYHMDLLLK
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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