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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7wtvK_

Fold library idPDB HeaderMoleculeTitle
c7wtvK_3.50PDB header: ribosomeChain: K: PDB Molecule: rrp12-like protein;


Added to library: Sat Oct 22 11:30:04 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TFSKVQRFWESNSAAHKEICAVLAAVTEVIRSQGGKETETEYFAALMTTMEAVESPESLAAVAYLLNLVL
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Known secondary structure (DSSP)


SS


SSSSSTTTTTTTTTTTTT

TTTTT
SS


TTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence KRVPSPVLIKKFSDTSKAFMDIMSAQASSGSTSVLRWVLSCLATLLRKQPVTLQVYHGLLSFTVHPKPKI
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Known secondary structure (DSSP) TS

TTT
S


TTTT
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence RKAAQHGVCSVLKGHPAAISTAKFCIQEIEKSATTTLHMLTLLKDLLPCFPEGLVKSCSETLLRVMTLSH
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Known secondary structure (DSSP)


T

TTSTT

TTSS

 .........220.........230.........240.........250.........260.........270.........280
Sequence VLVTACAMQAFHSLFHARPGLSTLSAELNAQIITALYDYVPSENDLQPLLAWLKVMEKAHINLVRLQWDL
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Known secondary structure (DSSP) T


TTTS
TTT

SS


S
 .........290.........300.........310.........320.........330.........340.........350
Sequence GLGHLPRFFGTAVTCLLSPHSQVLTAATQSLKEILKECVAPHMADIGSVTSSASGPAQSVAKMFRAVEEG
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Known secondary structure (DSSP) GGG
S
TTSTT



TT

STGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence LTYKFHAAWSSVLQLLCVFFEACGRQAHPVMRKCLQSLCDLRLSPHFPHTAALDQAVGAAVTSMGPEVVL
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Known secondary structure (DSSP) GSTTTSSSSTT
TTTTTTSSS
TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence QAVPLEIDGSEETLDFPRSWLLPVIRDHVQETRLGFFTTYFLPLANTLKSKAMDLAQAGSTVESKIYDTL
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Known secondary structure (DSSP) S

S
SS

S
SS
TTTTTT

SS
TTTT
TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence QWQMWTLLPGFCTRPTDVAISFKGLARTLGMAISERPDLRVTVCQALRTLITKGCQAEADRAEVSRFAKN
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Known secondary structure (DSSP) TTTTSS
S
GGGTS
STTS

ST
 .........570.........580.........590.........600.........610.........620.........630
Sequence FLPILFNLYGQPVAPRRAVLETIRTYLTITDTQLVNSLLEKASEKVLDPASSDFTRLSVLDLVVALAPCA
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Known secondary structure (DSSP)




TTTS

TTS
STTS
 .........640.........650.........660.........670.........680.........690.........700
Sequence DEAAISKLYSTIRPYLESKAHGVQKKAYRVLEEVCASPQGPGALFVQSHLEDLKKTLLDSLRSTSSPAKR
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Known secondary structure (DSSP)
GGGGG
S
TT
SSSSTSTT

STT
 .........710.........720.........730.........740.........750.........760.........770
Sequence PRLKCLLHIVRKLSAEHKEFITALIPEVILCTKEVSVGARKNAFALLVEMGHAFLRFGSNQEEALQCYLV
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Known secondary structure (DSSP) TT

STTTTGGGSS
STT
SS
 .........780.........790.........800.........810.........820.........830.........840
Sequence LIYPGLVGAVTMVSCSILALTHLLFEFKGLMGTSTVEQLLENVCLLLASRTRDVVKSALGFIKVAVTVMD
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Known secondary structure (DSSP) TTGGGGSS
STTTT
GGGTT
S
S
 .........850.........860.........870.........880.........890.........900.........910
Sequence VAHLAKHVQLVMEAIGKLSDDMRRHFRMKLRNLFTKFIRKFGFELVKRLLPEEYHRVLVNIRKAEARAKG
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Known secondary structure (DSSP) TTTS
SS
STS
S

 .........920.........930.........940.........950.........960.........970.........980
Sequence DSIEEILADSRQRSRAWLKEDEPLNFLDPKVAQRVLATQPGGFKVSADGRLIIRPGAEYKAKKAKGDVKK
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Known secondary structure (DSSP)
SS




S









TTSTTGGGGSS





TTS




GGG

SSSSS



 .........990...
Sequence KGRPDPYAYIPLN
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Known secondary structure (DSSP) SSS
SS







Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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