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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7ws5C_

Fold library idPDB HeaderMoleculeTitle
c7ws5C_3.70PDB header: viral protein/immune systemChain: C: PDB Molecule: spike glycoprotein;


Added to library: 3.70
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHVIKRFDNPVLPFNDGVY
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TT


B

SS



S


TT









TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence FASIEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLDMESEFRVYSSANNCTFEYV
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Known secondary structure (DSSP) SS

SSSSSSS

SS





 .........150.........160.........170.........180.........190.........200.........210
Sequence SQPFLNFKNLREFVFKNIDGYFKIYSKHTPIDLPQGFSALEPLVDLPIGINITRFQTLLALHRSGWTAGA
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Known secondary structure (DSSP)






TT



SS


B






B
B



B


 .........220.........230.........240.........250.........260.........270.........280
Sequence AAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNI
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Known secondary structure (DSSP)

TTS
TTSSTSS


S







 .........290.........300.........310.........320.........330.........340.........350
Sequence TNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNLAPFFTFKCYGVSPTKLNDLCFTNVYADSFVI
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Known secondary structure (DSSP)

B


S
S


BSTT

S


T
SS

SS
GGGGGT
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence RGDEVRQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLKPFERDISTEI
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Known secondary structure (DSSP) TGGGGG
STT

ST



SS


TTTS

SS
B
S



SS


TT







 .........430.........440.........450.........460.........470.........480.........490
Sequence YQAGNKPCNGVAGFNCYFPLRSYSFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFN
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Known secondary structure (DSSP)
SSS

TT


TT
S

B
TTS
GGGS

SSS



S







SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence FNGLKGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLY
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Known secondary structure (DSSP) TT





TT


B

TTS



SSS






TTT



 .........570.........580.........590.........600.........610.........620.........630
Sequence QGVNCTEVNVFQTRAGCLIGAEYVNNSYECDIPIGAGICASYQSIIAYTMSLGAENSVAYSNNSIAIPTN
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Known secondary structure (DSSP) TS
GGG


SSS

S




STT













TT
 .........640.........650.........660.........670.........680.........690.........700
Sequence FTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLKRALTGIAVEQDKNTQEVFAQVKQ
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TSS
TTS
S


SS
 .........710.........720.........730.........740.........750.........760.........770
Sequence IYKTPPIKYFGGFNFSQILPDPSKPSKRSPIEDLLFNKVTAQKFKGLTVLPPLLTDEMIAQYTSALLAGT
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SS

BTTB

TTTS

SSSTT








SS


SS
 .........780.........790.........800.........810.........820.........830.........840
Sequence ITSGWTFGAGPALQIPFPMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTPSALGKLQDV
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Known secondary structure (DSSP) STTGGGSSS




TT

S
SSTT
 .........850.........860.........870.........880
Sequence VNHNAQALNTLVKQLSSKFGAISSVLNDIFSRLc7ws5C_
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Known secondary structure (DSSP) TT

TTSS
S
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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