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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7wp9C_

Fold library idPDB HeaderMoleculeTitle
c7wp9C_2.56PDB header: viral proteinChain: C: PDB Molecule: spike glycoprotein;


Added to library: 2.56
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHDNPVLPFNDGVYFASIEKSN
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SS


B

SS



S



TT
B






S


B
SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence IIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLDEFRVYSSANNCTFEYVSQPFLMDFKNL
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Known secondary structure (DSSP) SS

SSSSSSS



SS





SS





TT
S


S

SSSS




 .........150.........160.........170.........180.........190.........200.........210
Sequence REFVFKNIDGYFKIYSKHTPIIVREPEDLPQGFSALEPLVDLPIGINITRFQTLLAYYVGYLQPRTFLLK
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Known secondary structure (DSSP) TT




SSS



S


B













B


 .........220.........230.........240.........250.........260.........270.........280
Sequence YNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFDEVFNATRFA
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Known secondary structure (DSSP)
TTS
TTT
TSS


S


SSB

B








T
S


 .........290.........300.........310.........320.........330.........340.........350
Sequence SVYAWNRKRISNCVADYSVLYNLAPFFTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGNI
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Known secondary structure (DSSP)
STT




S

SSS





SBS
SGGGGT

BS



SS
TTTS
BT

SSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence ADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGFNC
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Known secondary structure (DSSP) TTTT

B
TT



B


TTTS

SS


SSS

SS


SS







SSSS

TTS
BTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence YFPLRSYSFRPGHQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLKGTGVLTESNKKFLPF
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Known secondary structure (DSSP)








S




S
SS


S







SSTT





TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence QQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQGVNCTEVPVAIHADQLTPT
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Known secondary structure (DSSP)

B


SSS

S
SSS



S

TTT



T

TTSS


SS

SS
SS
 .........570.........580.........590.........600.........610.........620.........630
Sequence WRVYSTGSNVFQTRAGCLIGAEYVNNSYECDIPIGAGICASYQTQASQSIIAYTMSLGAENSVAYSNNSI
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Known secondary structure (DSSP) SS




S
TTS

S




STT














SS

 .........640.........650.........660.........670.........680.........690.........700
Sequence AIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLKRALTGIAVEQDKNTQEVF
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Known secondary structure (DSSP)




T
SS


TTTGGGT
SS
 .........710.........720.........730.........740.........750.........760.........770
Sequence AQVKQIYKTPPIKYFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTLADAGFIKQRDLICAQKFKGLTVLP
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Known secondary structure (DSSP)


SS




SS

SSS


TTTS

SSSTT


S






S




TTTTGGGT
 .........780.........790.........800.........810.........820.........830.......
Sequence PLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLc7wp9C_
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Known secondary structure (DSSP)
SS
TTTGGGSSS




TTTT

TS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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