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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7wp9B_

Fold library idPDB HeaderMoleculeTitle
c7wp9B_2.56PDB header: viral proteinChain: B: PDB Molecule: spike glycoprotein;


Added to library: 2.56
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NLTTRTQPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHDNPVLPFNDGVYFASIEKSNI
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Known secondary structure (DSSP)









SS


B
SSS



S

SS







SS

SS

 .........80.........90.........100.........110.........120.........130.........140
Sequence IRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLDEFRVYSSANNCTFEYVSQPFLMDFKNLR
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Known secondary structure (DSSP)

S
SSS
TT



SS




B
SS





TTBS





S
S





 .........150.........160.........170.........180.........190.........200.........210
Sequence EFVFKNIDGYFKIYSKHTPIIVREPEDLPQGFSALEPLVDLPIGINITRFQTLLAYYVGYLQPRTFLLKY
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Known secondary structure (DSSP)

TTSB

B

S
STT



S


B


B





S



 .........220.........230.........240.........250.........260.........270.........280
Sequence NENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFDEVFNATRFAS
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Known secondary structure (DSSP)
SSS
TTS
TTSS


SB











SSS
S



 .........290.........300.........310.........320.........330.........340.........350
Sequence VYAWNRKRISNCVADYSVLYNLAPFFTFKCYGVSPTKLNDLCFTNVYADSFVIRGEVRQINIDYNKLPDD
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Known secondary structure (DSSP) STT



SSB

TTSSS

SSS
GGGSSS

BS




TTT








TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence FTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLKPFERDEIYQAGNKPCNGVAGFNCYFPLRSYSFRQPY
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Known secondary structure (DSSP) SSS

TTTSS
SS



S
B



SS


SSS






SSS


SS
BTTB

S
B





 .........430.........440.........450.........460.........470.........480.........490
Sequence RVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLKGTGVLTESNKKFLPFQQFGRDIADTTDAVRD
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Known secondary structure (DSSP)


S
SS

BB
S







SSTT






TT


TT



 .........500.........510.........520.........530.........540.........550.........560
Sequence PQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQGVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAG
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Known secondary structure (DSSP) SSS








TTT



T

TTSS


SSS
TT

BS





S

SS
 .........570.........580.........590.........600.........610.........620.........630
Sequence CLIGAEYVNNSYECDIPIGAGICASYQTQASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILP
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Known secondary structure (DSSP) S

S




STT














SS
 .........640.........650.........660.........670.........680.........690.........700
Sequence VSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLKRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKYFG
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Known secondary structure (DSSP)




S
SSSGGGGTGGGT
ST


SS




SS

SS
 .........710.........720.........730.........740.........750.........760.........770
Sequence GFNFSQILPDPSKPSKRSFIEDLLFNKVTLADAGFIKQRDLICAQKFKGLTVLPPLLTDEMIAQYTSALL
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Known secondary structure (DSSP) S


TTTS

SSSSS


TTSSS






S




GGGGGGGT

SS
 .........780.........790.........800.........810.........820.........830.........840
Sequence AGTITSGWTFGAGAALQIPFAMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKL
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Known secondary structure (DSSP) TTTTTTTSS




TTT

TSSSS
SS
 .........850.........860.........870.........880.....
Sequence QDVVNHNAQALNTLVKQLSSKFGAISSVLNDIFSRLDPc7wp9B_
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Known secondary structure (DSSP) TSS

SSSS
S
S
GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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