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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7wooZ_

Fold library idPDB HeaderMoleculeTitle
c7wooZ_3.71PDB header: transport proteinChain: Z: PDB Molecule: nucleoporin nic96;


Added to library: Wed Jun 22 06:15:19 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SGTSKGANKKLNELLESSDNLSIQVSINELRRRVFQLRSKNGLSFEDVDAFIKDLQTNYIRTKKEENILM
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Known secondary structure (DSSP)
T



S






 .........80.........90.........100.........110.........120.........130.........140
Sequence SIEQLLNGATKDFDNFINHNLNLDWAQNILNSNESRLNVNENNILREKFENYARIVFQFNNSRQANGNFD
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Known secondary structure (DSSP) TT


SSSS




TTSSTT



 .........150.........160.........170.........180.........190.........200.........210
Sequence IANEFISILSSANGTRNAQLLESWKILESMKSKDINIVEVGKQYLEQQFLQYTDNLYKKNMNEGLATNVN
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Known secondary structure (DSSP) TTS

TTSSTTTSSS
S
TT

S
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence KIKSFIDTKLKKADKSWKISNLTVINGVPIWALIFYLLRAGLIKEALQVLVENKANIKKVEQSFLTYFKA
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Known secondary structure (DSSP) TB
TTS
BSS
S


BTTB
TT
TTTTTS
GGGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence YASSKDHGLPVEYSTKLHTEYNQHIKSSLDGDPYRLAVYKLIGRCDLSRKNIPAVTLSIEDWLWMHLMLI
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Known secondary structure (DSSP) GGS
SSS


TGGG

SS
TT


SS



TT

ST
 .........360.........370.........380.........390.........400.........410.........420
Sequence KEKDAENDPVYERYSLEDFQNIIISYGPSRFSNYYLQTLLLSGLYGLAIDYTYTFSEMDAVHLAIGLASL
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Known secondary structure (DSSP)
STT
SSS
GGG


TTTT
TTTT
TTT
T
 .........430.........440.........450.........460.........470.........480.........490
Sequence KLFKIDSSTRLTKKPKRDIRFANILANYTKSFRYSDPRVAVEYLVLITLNEGPTDVELCHEALRELVLET
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Known secondary structure (DSSP) T




TTS

SS

SS


TTTTTT

TGGGGG

 .........500.........510.........520.........530.........540.........550.........560
Sequence KEFTVLLGKIGRDGARIPGVIEERQPLLHVRDEKEFLHTITEQAARRADEDGRIYDSILLYQLAEEYDIV
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Known secondary structure (DSSP)

TTTTT



TT





SSTTTTTTTT


TT
TT
 .........570.........580.........590.........600.........610.........620.........630
Sequence ITLVNSLLSDTLSASDLDQPLVGPDDNSETNPVLLARRMASIYFDNAGISRQIHVKNKEICMLLLNISSI
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Known secondary structure (DSSP) TS
SSS
SS
TTS
TTTSTTSTS

 .........640.........650.........660.........670.........680.........690.........700
Sequence RELYFNKQWQETLSQMELLDLLPFSDELSARKKAQDFSNLDDNIVKNIPNLLIITLSCISNMIHILNESK
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Known secondary structure (DSSP) TT

TSS

S

SSSSTTS
T
S
 .........710.........720.........730.........740......
Sequence YQSSTKGQQIDSLKNVARQCMIYAGMIQYRMPRETYSTLINIDVSL
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Known secondary structure (DSSP)


SSTT


SSSST


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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