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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7wmpf_

Fold library idPDB HeaderMoleculeTitle
c7wmpf_3.60PDB header: viral proteinChain: F: PDB Molecule: nozzle protein gp25;


Added to library: Sat Mar 4 09:53:21 2023
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MDFTTLQNDFTNDYQKALIANNEFLEAKKYYNGNQLPQDVLNIILERGQTPIIENMFKVIVNKILGYKIE
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Known secondary structure (DSSP)

TTTT

S
TT






TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SISEIRLSPKQEEDRALSDLLNSLLQVFIQQENYDKSMIERDKNLLIGGLGVIQLWVSQDKDKNVEIEIK
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Known secondary structure (DSSP) S
SSSTTSSSSS

B
SSS
B

 .........150.........160.........170.........180.........190.........200.........210
Sequence AIKPESFVIDYFSTDKNALDARRFHKMLEVSEQEALLLFGDSVIVNYSNVNHERIASVIESWYKEYNEET
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Known secondary structure (DSSP)
GGG

TT

SGGGTT
S
S
TTS





SSSS


SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence QSYEWNRYLWNRNTGIYKSEKKPFKNGACPFIVSKLYTDELNNYYGLFRDIKPMQDFINYAENRMGNMMG
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Known secondary structure (DSSP) SSTTTSTTSS


SSSB
TTS
B
TTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence SFKAMFEEDAVVDVAEFVETMSLDNAIAKVRPNALKDHKIQFMNNQADLSALSQKAEQKRQLLRLLAGLN
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Known secondary structure (DSSP)


TTSSSSTSSS





TT
SSS




SSTT

 .........360.........370.........380.........390.........400.........410.........420
Sequence DESLGMAVNRQSGVAIAQRKESGLMGLQTFLKATDDMDRLIFRLAVSFICEYFTKEQVFKIVDKKLGDRY
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Known secondary structure (DSSP) S

TT


SSS






STT

TTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence FKDDNKIRPLKFDLILKSQLKTESRDEKWYNWNELLKILAPIRPDLVPSLVPLMLNDMDSPITNDVLEAI
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Known secondary structure (DSSP)


TTS



SSS



GGGSTTTTT


TT
 .........500.........510.........520.........530.........540.........550.........
Sequence QNANALQQQNAEANAPYNQQIQALQIQKLQAEIMELQAKAHKYAEQGALSQTTNESEKINQAVAITEMQ
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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