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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7wlzA_

Fold library idPDB HeaderMoleculeTitle
c7wlzA_2.98PDB header: viral protein,immune systemChain: A: PDB Molecule: spike glycoprotein;


Added to library: 2.98
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHVKRFDNPVLPFNDGVYFASIEKSNIIRGWI
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Known secondary structure (DSSP)

S


SSS



S


TT








SS



SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence FGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLDRVYSSANNCTFEYVSQPFLMDNFKNLREFVFKN
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Known secondary structure (DSSP) SS
SSSS


SS

B




SS




TT




BS


S
SS




 .........150.........160.........170.........180.........190.........200.........210
Sequence IDGYFKIYSKHTPIIVEDLPQGFSALEPLVDLPIGINITRFQTLLALHAAAYYVGYLQPRTFLLKYNENG
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Known secondary structure (DSSP) TT





S

















TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence TITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFDEVFNATRFASVYAW
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Known secondary structure (DSSP)
TTSSTSS


S




B

B









S
S


BSTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence NRKRISNCVADYSVLYNLAPFFTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGNIADYNY
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Known secondary structure (DSSP)
S
B


S
TT

SSS
TT
GGGS
BGGGGTTSSTT

ST
 .........360.........370.........380.........390.........400.........410.........420
Sequence KLPDDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLKPFERDILRSYSFRPTYGVGHQPYRVVVLSFE
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Known secondary structure (DSSP)


TT




TT


S




SS


TT








TTS
TTSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence LLHAPATVCGPKKSTNLVKNKCVNFNFNGLKGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILD
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Known secondary structure (DSSP)
SSS


BB
S






SSSTT





TT





SSSS


TTT

 .........500.........510.........520.........530.........540.........550.........560
Sequence ITPCSFGGVSVITPGTNTSNQVAVLYQGVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEYV
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TTT



SS
TTS
TTTT
SSS
T
S


SSS

 .........570.........580.........590.........600.........610.........620.........630
Sequence NNSYECDIPIGAGICASYQTSQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDC
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Known secondary structure (DSSP) S




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 .........640.........650.........660.........670.........680.........690.........700
Sequence TMYICGDSTECSNLLLQYGSFCTQLKRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKYFGGFNFSQILPD
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Known secondary structure (DSSP) STT

T


SS




SS

BTTB

TTTS

 .........710.........720.........730.........740.........750.........760.........770
Sequence PSKPSKRSPIEDLLFNKVTLADAGFIKQDLICAQKFKGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFG
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Known secondary structure (DSSP) SSSSS


S



SSSS


TTT

SS
T
SGGG
 .........780.........790.........800.........810.........820.........830.........840
Sequence AGPALQIPFPMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTPSALGKLQDVVNHNAQAL
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Known secondary structure (DSSP) SSS




TTT

SS
GGGG
 .........850.........860.........870.........880.........890.........900....
Sequence NTLVKQLSSKFGAISSVLNDIFSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAc7wlzA_
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Known secondary structure (DSSP) GGG

TTSS
S
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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