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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7wkkc_

Fold library idPDB HeaderMoleculeTitle
c7wkkc_4.20PDB header: structural proteinChain: C: PDB Molecule: nuclear pore complex protein nup93;


Added to library: Tue Jun 21 19:46:07 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LQEIQQAGERLRSKDIQGFLKNEKDNALLSAIEESRKRTFVMAEEYHRESMLVEWEQVKQRVLHTLLASG
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TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence DNVEMAYARQMYMYNEKVVSGHLQPSLVDLCTEAAERLDDKNVSDLWVMVKQMTDVPLDTLKSRCSGQMQ
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TT




TT

S


TS
 .........150.........160.........170.........180.........190.........200.........210
Sequence MAFVRQALNYLEQSYKNYTLISVFAGTYNLVRSFLNIRLPTPIPGLQDGEIEGYPVWALIYYCMRCGDLM
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SS

TT

S
TTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence AAQQVVNRAQHQLGDFKNCFQEYIHNKDRRLSPTTENKLRLHYRRAVRASTDPYKRAVYCIIGRCDVSDN
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Known secondary structure (DSSP) TTT
TT



TGGG
S



TT

 .........290.........300.........310.........320.........330.........340.........350
Sequence HSEVADKTEDYLWLKLSQVCFLPQFQKQLFEDYGESHFAVNQQPYLYFQVLFLTAQFEAAIAFLFRLERT
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TTT

S



TTTTTTTT
TTT
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence RCHAVHVALALFELKFIRLLMLYTRKFEPTDPREALQYFYFLRNEKDNQGESMFLRCVSELVIESREFDM
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TTTTTT
GGGGG


TTS

T
 .........430.........440.........450.........460.........470.........480.........490
Sequence LLGKLEKDGSRKPGAIDKFTRDTKTIINKVASVAENKGLFEEAAKLYDLAKNPDKVLELTNKLLSPVVSQ
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Known secondary structure (DSSP) T
TTS

SGGGT
S

T
TT
GGGGS
 .........500.........510.........520.........530.........540.........550.........560
Sequence ISAPQSNRERLKNMALAIAERYKSQKSINSTFYLLLDLITFFDEYHAGHIDLSFDVIERLKLVPLSQDSV
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STTTSS

T

T
S

SSTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence EERVAAFRNFSDEIRHNLSEILLATMNILFTQYKRLKGVQEDKDSVLRSQARALITFAGDTNARLVQMEV
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Known secondary structure (DSSP) S




 ...
Sequence LMN
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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