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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7whiC_

Fold library idPDB HeaderMoleculeTitle
c7whiC_2.93PDB header: viral proteinChain: C: PDB Molecule: spike glycoprotein;


Added to library: 2.93
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHVIRFDNPVLPFNDGVYF
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S


B
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S

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SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence ASIEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLEFRVYSSANNCTFEYVSQPFL
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SS
SSSS

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S




STT

 .........150.........160.........170.........180.........190.........200.........210
Sequence MQGNFKNLREFVFKNIDGYFKIYSKHTPIIVREPEDLPQGFSALEPLVDLPIGINITRFQTLLALHRSAA
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S

SS



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 .........220.........230.........240.........250.........260.........270.........280
Sequence AYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNIT
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TTS

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S


S













 .........290.........300.........310.........320.........330.........340.........350
Sequence NLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNLAPFFTFKCYGVSPTKLNDLCFTNVYADSFVIR
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STTTSSSS


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SSB

SSSSSSSS




SSS
SSSTTS

BS
 .........360.........370.........380.........390.........400.........410.........420
Sequence GDEVRQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLKPFERDISTEIY
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Known secondary structure (DSSP) GGGSTTSSSS

SST



SS




TTTS

TT
BTT




SS


TT








 .........430.........440.........450.........460.........470.........480.........490
Sequence QAGNKPCNGVAGFNCYFPLRSYSFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNF
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SSS



S


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S


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SS

 .........500.........510.........520.........530.........540.........550.........560
Sequence NGLKGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQ
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Known secondary structure (DSSP) SS


S


SS





TT




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S
TTT



 .........570.........580.........590.........600.........610.........620.........630
Sequence GVNCTEVNVFQTRAGCLIGAEYVNNSYECDIPIGAGICASYQTSQSIIAYTMSLGAENSVAYSNNSIAIP
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SS




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SS
BT

SS



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SS
 .........640.........650.........660.........670.........680.........690.........700
Sequence TNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLKRALTGIAVEQDKNTQEVFAQV
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STTS
ST


 .........710.........720.........730.........740.........750.........760.........770
Sequence KQIYKTPPIKYFGGFNFSQILPDPSKPSKRSPIEDLLFNKVTRDLICAQKFKGLTVLPPLLTDEMIAQYT
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Known secondary structure (DSSP) SS




S


SSS


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SSSTT


TT



GGGTSGGGT


SS
 .........780.........790.........800.........810.........820.........830.........840
Sequence SALLAGTITSGWTFGAGPALQIPFPMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTPSA
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Known secondary structure (DSSP) TSSSS




TTT


SGG
 .........850.........860.........870...
Sequence LGKLQDVVNHNAQALNTLVKQLSSKFc7whiC_
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Known secondary structure (DSSP) GGGG

TTSS
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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