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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7wb4I_

Fold library idPDB HeaderMoleculeTitle
c7wb4I_5.60PDB header: structural proteinChain: I: PDB Molecule: nuclear pore complex protein;


Added to library: Sat Mar 5 09:09:05 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SFTEDITLSAVMLQEEDPGEAATMSMYPDFLKSFLEHPSSAVFELIEQYEATCNTQITLLKKIVKRVTPG
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Known secondary structure (DSSP)
TTSS
SS
GGGS
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence QQKFSKTASILWLLQQEMVTWRLIAALYRDRIQSALEEENMFEIAAPNASEKTIVDKLFQRDTLVRQSQL
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Known secondary structure (DSSP)
GGGSSS






S




 .........150.........160.........170.........180.........190.........200.........210
Sequence VVDWLESIAKDEVGDFSDNIEYYAKSVYWENTLHTLKQRSMLSLGSSRPLVSELDPDAPIRQKLPLDDLD
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Known secondary structure (DSSP) TTS






TTS

SS




S

STTT



 .........220.........230.........240.........250.........260.........270.........280
Sequence REDDIRLLKYLFTLIRAGMTDEAQRLCKRCGQAWRAATLEGWKLYHDANINGGTELQAVEGNPYRCVWKT
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Known secondary structure (DSSP) TT
TT
TTTTS

B
TTTT

SS



BS
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence CCWRMAEDEQFNKYERAIYATLSGNLKQLLPVCESWEDTVWAHFKVMVDSLVEQEIRASIISFNEANELP
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Known secondary structure (DSSP)
TTS
T
GGG

ST

S


S



 .........360.........370.........380.........390.........400.........410.........420
Sequence REYLEANWTLDSVFEELQATDKKRVLEENREHYHIIQKFVILADVDGLMDEFSEWLSNGKNLLLGHLLRF
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Known secondary structure (DSSP) GGGTS






TTST
GGGS
 .........430.........440.........450.........460.........470.........480.........490
Sequence MTHLLLFFRTLGLQAKEEVSVEVLKTYIQRLINEKQIELIAFYVSHLPQELAISQYAVFLENITDPDQRQ
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Known secondary structure (DSSP) TT




TT
TS
TTT


 .........500.........510.........520.........530.........540.........550.........560
Sequence RCLELAKEAGLDVASITKTVVENTRKKDAGEFAHHDFAPALDSGTSEEDRAKIDVIDWLVFDPAQRAEAL
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Known secondary structure (DSSP) T

S






TTS





S

TTSSSS

 .........570.........580.........590.........600.........610.........620.........630
Sequence KQSNAIMRKFLASKKHEAAKEVFAKIPQDSIAEIYSQWEEQAMDSALPAEDDNAIREHLCIRAYLESHEA
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Known secondary structure (DSSP) TT
S
TTTT

S


 .........640.........650.........660.........670.........680.........690.........700
Sequence FNEWFKHINSPPQKPTLVGQASFTEKVAHEHKEKKYEMDFGIWKGHLDALTSDVKEKIYNVLLFVDGGWM
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Known secondary structure (DSSP) T








TT

T
TTT
TT
 .........710.........720.........730.........740.........750.........760.........770
Sequence VDVREDTEEDPERSHQMVLLRRLCLPMMCFLLHTVLHNTKQYKDCLRLADIVSSENQKLYTVFSKTEMRN
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Known secondary structure (DSSP)

S


S


TT

TTTTGGGTS
 .........780.........790......
Sequence LLQKLRESSLMLLDLQLDPLGYEIQS
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Known secondary structure (DSSP) TTB
TTS
B



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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