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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7wayA_

Fold library idPDB HeaderMoleculeTitle
c7wayA_2.90PDB header: rna binding protein/rna/dnaChain: A: PDB Molecule: dplmcasx;


Added to library: Wed Jun 22 09:15:07 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IKRINKIRRRLVKDSNTKKAGKTGPMKTLLVRVMTPDLRERLENLRKKPENIPQPISNTSRANLNKLLTD
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Known secondary structure (DSSP)


TS


SS



T
SS

S






 .........80.........90.........100.........110.........120.........130.........140
Sequence YTEMKKAILHVYWEEFQKDPVGLMSRVAQPAPKNIDQRKLIPVKSSGFACSQCCQPLYVYKLEQVNDKGK
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Known secondary structure (DSSP)
B



TT








TTTT
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PHTNYFGRCNVSEHERLILLSPHKTYSLGKFGQRALDFYSIHVTRESNHPVKPLEQIGGNSCASGPVGKA
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Known secondary structure (DSSP)
S
STT








B
SSSS

TSTT


S

TS
S
B
 .........220.........230.........240.........250.........260.........270.........280
Sequence LSDACMGAVASFLTKYQDIILEHQKVIKKNEKRLANLKDIASANGLAFPKITLPPQPHTKEGIEAYNNVV
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Known secondary structure (DSSP) TT












S
 .........290.........300.........310.........320.........330.........340.........350
Sequence AQIVIWVNLNLWQKLKIGRDEAKPLQRLKGFPSFPLVERQANEVDWWDMVCNVKKLINEKKEDGKVFWQN
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Known secondary structure (DSSP) TTTTS


TTTS











TTTS






TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence LAGYKRQEALLPYLSSEEDRKKGKKFARYQFGDLLLHLEKKHGEDWGKVYDEAWERIDKKVEGLSKHIKL
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Known secondary structure (DSSP)

STGGGS

TT


TT
 .........430.........440.........450.........460.........470.........480.........490
Sequence EEERRSEDAQSKAALTDWLRAKASFVIEGLKEADKDEFCRCELKLQKWYGDLRGKPFAIEAENSILDISG
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Known secondary structure (DSSP) T


GGGTTT
GGG







 .........500.........510.........520.........530.........540.........550.........560
Sequence FSKQYNCAFIWQKDGVKKLNLYLIINYFKGGKLRFKKIKPEAFEANRFYTVINKKSGEIVPMEVNFNFDD
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Known secondary structure (DSSP) SSGGGTTTT



BTT




TT


TT

TTS


TT
 .........570.........580.........590.........600.........610.........620.........630
Sequence PNLIILPLAFGKRQGREFIWNDLLSLETGSLKLANGRVIEKTLYNRRTRQDEPALFVALTFERREVLDSS
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Known secondary structure (DSSP) TT


TTS
SSS
TTTTSTTTT


T
 .........640.........650.........660.........670.........680.........690.........700
Sequence NIKPMNLIGIARGENIPAVIALTDPEGCPLSRFKDSLGNPTHILRIGESYKEKQRTIQAAKEVEQRRAGG
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Known secondary structure (DSSP) T




SSSS
TTS
B



TT

SSTTSS
 .........710.........720.........730.........740.........750.........760.........770
Sequence YSRKYASKAKNLADDMVRNTARDLLYYAVTQDAMLIFANLSRGFGRQGKRTFMAERQYTRMEDWLTAKLA
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Known secondary structure (DSSP)

GGGTTT


TT




SS

GGG

 .........780.........790.........800.........810.........820.........830.........840
Sequence YEGLPSKTYLSKTLAQYTSKTCSNCGFTITSADYDRVLEKLKKTATGWMTTINGKELKVEGQITYYNRYK
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Known secondary structure (DSSP) TT

GGGT

TTSTTB
TTT

B


TTTT


TTT
 .........850.........860.........870.........880.........890.........900.........910
Sequence RQNVVKDLSVELDRLSEESVNNDISSWTKGRSGEALSLLKKRFSHRPVQEKFVCLNCGFETHAAEQAALN
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Known secondary structure (DSSP) TSSSTT
GGGS
T
S
SBTT
TTT

 .........920.........930.........940.........950.........960
Sequence IARSWLFLRSQEYKKYQTNKTTGNTDKRAFVETWQSFYRKKLKEVWKPAV
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Known secondary structure (DSSP) TTSSTTS


T





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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