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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7w84A_

Fold library idPDB HeaderMoleculeTitle
c7w84A_3.40PDB header: plant proteinChain: A: PDB Molecule: rna-dependent rna polymerase;


Added to library: Tue Jun 21 20:04:50 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LSLRAASASLILGNRVAERELEVAYSCDGVRAEVIPRMRRVDLYLKHDSQSYKLEVLFEDINECFGCHLD
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Known secondary structure (DSSP)




SSSS
GGGTTTSSSB

B

S
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence GTGAILLQLTYAPRIHIAISGSTAWVRALDFTPNSSFGECSTLVLKLSKGASVSYILESLPFSGELGELA
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Known secondary structure (DSSP) SS


BSS



SS










TT






TTT
TT


TTS

B





B
 .........150.........160.........170.........180.........190.........200.........210
Sequence IASMDVFGSSSNVVPLVDCPNGFSVPYEVLFRLNSLVHMGKLVARHVNADLFKVLEDLSIDTLRRIFEKM
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Known secondary structure (DSSP)








STT

S




TT



TSS
STT

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence SKLKSTCYEPLQFIRHEAHSMNMRKKALSNKRESGKLMRCYRIHITPSKIYCLGPEEEVSNYVVKYHSEY
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Known secondary structure (DSSP) TT
SS

S

S

S
S

S

S


SS






S
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence ASDFARVTFVDEDWSKLSPNALSARTEQGFFSKPLKTGLYHRILSILKEGFCIGPKKYEFLAFSASQLRG
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Known secondary structure (DSSP) TTT

B
TTSSB

GGGT



GGG
SSS



T
TT

T
 .........360.........370.........380.........390.........400.........410.........420
Sequence NSVWMFASNSSLTAENIRRWMGHFEDIRSVSKCAARMGQLFSSSRQTFEVSSYDVEVIPDIEVTTDGTKY
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Known secondary structure (DSSP) T



SS




SS


TT
S





B

TTT

B



SSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence IFSDGIGKISTRFARQVAKLIGLDPAHPPSAFQIRYGGYKGVITIDPTSFFNLSLRPSMKKFESKSTMLN
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Known secondary structure (DSSP) S
TT
TTTS
TTS

STT



SSS

B
TTTBSS




BB
 .........500.........510.........520.........530.........540.........550.........560
Sequence ITNWSKSQPCYVNREIISLLSTLGIKDEVFESMQQDDMHESDGMLTNKEAALSVLGKIGGGDTKTAADML
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Known secondary structure (DSSP)
S


B


TTT

TTT
TS
S
 .........570.........580.........590.........600.........610.........620.........630
Sequence LQGYEPSSEPYLLMILKAHRANRLTDIRTRCKIHVQKGRVLIGCLDETCKLEYGQVYIRITKNHKEQKYS
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Known secondary structure (DSSP) TT

TTT



SS
SS

S
TTB



GGGSS

 .........640.........650.........660.........670.........680.........690.........700
Sequence EQPFFCNDDGKTAVIVGKVAITKNPCLHPGDVRVLEAVYDPGLDARGLIDCVVFPQRGERPHPNECSGGD
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Known secondary structure (DSSP)

TT
SS
S

SS

STTSS


TT

S

S
SSS
SGGGSSS

 .........710.........720.........730.........740.........750.........760.........770
Sequence LDGDLFFITWDDKLIPEKVDAPMDYTATRPRIMDHAVTLEEIQKHFVSYMINDTLGAISTAHLIHADRDP
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Known secondary structure (DSSP)
SS


TTTS
SS
















S



TSS
 .........780.........790.........800.........810.........820.........830.........840
Sequence LKARSPECVQLAALHSMAVDFAKTGAPAEMPLALRPREFPDFMERWERPMYVSNGVLGKLYRAALRHAAD
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Known secondary structure (DSSP) SSS
SGGGTTT






TTTS
S


GGG

TTS





S
 .........850.........860.........870.........880.........890.........900.........910
Sequence AAALLPAGPPSCVYDPDLEVAGFDEFLDAAEERYEAYAERLGALMTYYSAEREDEILTGNIRNKLVYLRR
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Known secondary structure (DSSP)


TTS







SSSS
SS
SSSSTT

ST

SS

S
 .........920.........930.........940.........950.........960.........970.........980
Sequence DNKRYFEMKDRIIAAVDALHAEVRGWLRACKEDDASRVASAWYHVTYHPDRRGEKRFWSFPWIICDTLLA
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Known secondary structure (DSSP)
SS
GGGSTTT
SS




SGGGGT
 .........990.....
Sequence IKAARRCRKRVEDAA
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Known secondary structure (DSSP) TSS
SSSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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