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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7vyxB_

Fold library idPDB HeaderMoleculeTitle
c7vyxB_3.20PDB header: rna binding protein/rna/dnaChain: B: PDB Molecule: selenomethionine (semet)-labeled cas12c1 d969a mutant;


Added to library: Sat Nov 5 10:55:37 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LHLISAKASRKYRRTIACLSDTAKKDLERRKQSGAADPAQELSCLKTIKFKLEVPEGSKLPSFDRISQIY
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Known secondary structure (DSSP)




TTTS



SSSS


SS




 .........80.........90.........100.........110.........120.........130.........140
Sequence NALETIEKGSLSYLLFALILSGFRIFPNSSAAKTFASSSCYKNDQFASQIKEIFGEVKNFIPSELESILK
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Known secondary structure (DSSP)

STTSTT
SSTTTT




TT
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence KGRRKNNKDWTEENIKRVLNSEFGRKNSEGSSALFDSFLSKFSQELFRKFDSWNEVNKKYLEAAELLDSL
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Known secondary structure (DSSP) S


GGGG


TT

SS

S
SSS


 .........220.........230.........240.........250.........260.........270.........280
Sequence ASYGPFDSVCKIGDSDSRNSLPDKSTIAFTNNAEITVDIESSVPYAIAALLREYRQSKSKAAPVAYVQSH
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Known secondary structure (DSSP) TTTS



S


T



TT


SSS



S

S




T
SS
T
 .........290.........300.........310.........320.........330.........340.........350
Sequence LTTTNGNGLSWFFKFGLDLIRKAPGSKSLQELFSVPDDKLDGLKFIKEACEALPEASLLCGEKGELLGYQ
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Known secondary structure (DSSP) TT
TTTTTTTT



TT

SSGGG
S



S
B
SS

B

GG
 .........360.........370.........380.........390.........400.........410.........420
Sequence DFRTSFAGHIDSWVANYVNRLFELIELVNSHSLELFEGLVKNVRQTLKKLAGIDPNEQDIKEFYAFSDVL
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Known secondary structure (DSSP) GG

TT



 .........430.........440.........450.........460.........470.........480.........490
Sequence NRLGSIRNQIENLKKLPKLNGLGGGVPKQQELLDKALESVKQIRHYQRIDFERVIQWAVNEHCLETVPKF
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Known secondary structure (DSSP)












S


TT



 .........500.........510.........520.........530.........540.........550.........560
Sequence LVDAEKKKINKESSTDFAAKENAVRFLLEGIGAAARGKTDSVSKAAYNWFVVNNFLAKKDLNRYFINCQG
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Known secondary structure (DSSP) T

S
SSTT

STT
B
TS


 .........570.........580.........590.........600.........610.........620.........630
Sequence CIYKPPYSKRRSLAFALRSDNKDTIEVVWEKFETFYKEISKEIEKFNIFSQEFQTFLHLENLRKLLLRRI
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Known secondary structure (DSSP)
SS

TTSTT
S



B
TT



GGGS
SSS



 .........640.........650.........660.........670.........680.........690.........700
Sequence QKPIPAEIAFFSLPQEYYDSLPPNVAFLTPSEYITQFNLYSSFLNGNLILLRRSRSYLRAKFSWVGNSKL
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Known secondary structure (DSSP)
S


TTT





TTT




SS





STT




TT


 .........710.........720.........730.........740.........750.........760.........770
Sequence IYAAKEARLWKIPNAYWKSDEWKILDSNVLVFDKAGNVLPAPTLKKVCEREGDLRLFYPLLRQLPHDWCY
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Known secondary structure (DSSP)
TT

B


GGGSSSTTT


TT

S
B
SSS
B
TSSS

GGGS
 .........780.........790.........800.........810.........820.........830.........840
Sequence RNPFVKSVGREKNVIEVNKEGEPKVASALPGSLFRLIGPAPFKSLLDDCFFNPLDKDLRECLIVDQEISQ
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Known secondary structure (DSSP)
SSS



SS



TTS




TTT


TTT



 .........850.........860.........870.........880.........890.........900.........910
Sequence KVEAQKVEASLESCTYSIAVPIRYHLEEPKVSNQFENVLAIAQGEAGLAYAVFSLKSIGEAETKPIAVGT
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Known secondary structure (DSSP) TT




S






TTS

TT

STT


 .........920.........930.........940.........950.........960.........970.........980
Sequence IRIPSIRRLIHSVSTYRKKKQRLQNFKQNYDSTAFIRENVTGDVCAKIVGLKEFNAFPVLEYDSRQLSAV
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Known secondary structure (DSSP)


TTS







SS

S

TTT



TT



 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence YKAVNSHFLYFKEPGRDALRKQLWYGGDSWTIDGIEIVTRERKEDGKEGVEKIVPLKVFPGRSVSARFTS
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Known secondary structure (DSSP) S

SSTTT





TTSS


SS


TTTT
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence KTCSCCGRNVFDWLFTEKKAFNVNSKGELTTADGVIQLFEADRSKGPKFYARRKERTPLTKPIAKGSYSL
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Known secondary structure (DSSP) TS
SSS


TT




TT
B


SS

BB
B



SS
T





SB


S


 .........1130.........1140.........1150.........1160.........1170.........1180..
Sequence EEIERRVRTNLRRAPKSKQSRDTSQSQYFCVYKDCALHFSGQADENAAINIGRRFLTALRKN
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Known secondary structure (DSSP)

S
SS
S

S




BSSST






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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