PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c7vvzK_

Fold library id	PDB Header	Molecule	Title
c7vvzK_	8.80	PDB header: dna binding protein/dna	Chain: K: PDB Molecule: swr1-complex protein 4;

Links to external resources
Added to library: Sat Aug 13 08:32:18 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M Q R E L F N L L G E N Q P P V V I K S K P S P W S F V E F K A N N S V T L R H W V K G K E S P Y S K F N Q H L S I P S F T K E E Y E A F M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S S
S S S S
B
G G G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S W S F E E I E Y L F N L C K K Y D L R W F L I F D R Y S Y N N S R T L E D L K E K F Y Y T C R N Y F K A S D P S N P L L S S L N F S A E K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
S
S
T T T
T T
G G G G T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E I E R K K Y L Q R L L S R S A A E I A E E E A L V V E S K K F E M A A K R T L A E R E S L L R L L D S P H S D Q T I T Q Y L T S Q G M S Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T
T T G G G G G S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . .

Sequence L Y N A L L A D K T R K R K H D L N I P E N P W M K Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	Q	R	E	L	F	N	L	L	G	E	N	Q	P	P	V	V	I	K	S	K	P	S	P	W	S	F	V	E	F	K	A	N	N	S	V	T	L	R	H	W	V	K	G	K	E	S	P	Y	S	K	F	N	Q	H	L	S	I	P	S	F	T	K	E	E	Y	E	A	F	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	S	S																					S	S	S	S											B		G	G	G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	W	S	F	E	E	I	E	Y	L	F	N	L	C	K	K	Y	D	L	R	W	F	L	I	F	D	R	Y	S	Y	N	N	S	R	T	L	E	D	L	K	E	K	F	Y	Y	T	C	R	N	Y	F	K	A	S	D	P	S	N	P	L	L	S	S	L	N	F	S	A	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T	T											S		S			T	T																		T		T	T		G	G	G	G	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	I	E	R	K	K	Y	L	Q	R	L	L	S	R	S	A	A	E	I	A	E	E	E	A	L	V	V	E	S	K	K	F	E	M	A	A	K	R	T	L	A	E	R	E	S	L	L	R	L	L	D	S	P	H	S	D	Q	T	I	T	Q	Y	L	T	S	Q	G	M	S	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T																					T	T																						T	T	G	G	G	G	G	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Sequence	L	Y	N	A	L	L	A	D	K	T	R	K	R	K	H	D	L	N	I	P	E	N	P	W	M	K	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T			T	T	S				T	T