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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7vudA_

Fold library idPDB HeaderMoleculeTitle
c7vudA_2.80PDB header: plant proteinChain: A: PDB Molecule: carotenoid cleavage dioxygenase 1;


Added to library: Sat Nov 5 10:48:49 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DAQRTGNIVAVKPKPSQGLTSKAIDWLEWLFVKMMHDSKQPLHYLSGNFAPVDETPPLKDLPVTGHLPEC
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Known secondary structure (DSSP)

STT







STTTS





GGGSGGGS




S





GG
 .........80.........90.........100.........110.........120.........130.........140
Sequence LNGEFVRVGPNPKFASIAGYHWFDGDGMIHGMRIKDGKATYVSRYVQTSRLKQEEFFGRAMFMKIGDLKG
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Known secondary structure (DSSP) G


SS

SS


GGGS
TT


TS

S

GGG
B
 .........150.........160.........170.........180.........190.........200.........210
Sequence MFGLLMVNMQMLRAKLKVLDISYGIGTANTALVYHHGKLLALSEADKPYAIKVLEDGDLQTIGLLDYDKR
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Known secondary structure (DSSP) TTSS

TT





STT
TTS


TTS

SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LAHSFTAHPKVDPFTGEMFTFGYSHTPPYVTYRVISKDGAMNDPVPITVSGPIMMHDFAITENYAIFMDL
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Known secondary structure (DSSP)

S


S


TTT


SSSS

TTS
B




SSSB





SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence PLYFKPKEMVKDKKFIFSFDATQKARFGILPRYAKNELLIKWFELPNCFIFHNANAWEEGDEVVLITCRL
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Known secondary structure (DSSP) S
TT
BS
TTS
TT
SSSTT
SS
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence ENPDLDMVNSTVKERLDNFKNELYEMRFNLQNGLASQKKLSVSAVDFPRVNESYTTRKQRYVYGTTLDKI
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Known secondary structure (DSSP) SS

GGGGSS


S

S



TTT


S
SS

GGGTTS

STT
 .........430.........440.........450.........460.........470.........480.........490
Sequence AKVTGIIKFDLHAEPETGKEKLELGGNVKGIFDLGPGRFGSEAVFVPRHPGITSEEDDGYLIFFVHDENT
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Known secondary structure (DSSP) TTTS


SS
SS

SBTT

TT


SS
SSSS
TT
TTS
 .........500.........510.........520.........530.....
Sequence GKSAVNVIDAKTMSPDPVAVVELPKRVPYGFHAFFVTEDQLQEQA
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Known secondary structure (DSSP)

TTT

SS
SSS




S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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