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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7vptA_

Fold library idPDB HeaderMoleculeTitle
c7vptA_2.50PDB header: protein transportChain: A: PDB Molecule: c. glabrata importin alpha arm domain - upc2 nls fusion;


Added to library: Sat Sep 10 09:47:09 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SSAADQQFYGQLQQELPQMVQQINSSDMQEQLAATVKFRQILSREHNPPIDIVIQSGVVPTLVNFMNENQ
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Known secondary structure (DSSP)

T
SST
SS


TT
TTSTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence PEMLQLEAAWALTNIASGTSAQTQVVVDAGAVPLFIQLLYTGSVELQEQAIWALGNVAGDSTSYRDYVLQ
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Known secondary structure (DSSP)
TTS
TTTS

 .........150.........160.........170.........180.........190.........200.........210
Sequence CSAMEPILSLFNSEKVTLIRTATWTLSNLCRGKKPQPDWSIVSKALPTLAKLIYSFDNETLIDACWAISY
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Known secondary structure (DSSP) TT
GGGG





TT


GGGTT
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence LSDGPAEAIQAVIDARIPKRLVELLSHQSTLVQTPALRAVGNIVTGNDLHTQVVINCGVLSALRNLLSSP
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Known secondary structure (DSSP) TSS
TT
TT
S
TTS
TTTT
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence KESIRKEACWTISNITAGNTEQIQAVVDANLIPPLIKLLETAEYKIKKEACWAISNASSGGLQRPEIIRY
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Known secondary structure (DSSP) STS
TT
S
GGGS
 .........360.........370.........380.........390.........400.........410.........420
Sequence MVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGETDKEARGLAINENADLIEKAGGMEKIFNCQQNE
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Known secondary structure (DSSP) TT
TTTS
T
SS
TTGGG
S
 .........430.........440.........450.........460.........
Sequence NDRIYEKAYKIIETYFGEELVPRGSEVNGKRVSKTSTGKRKFHKKSKTG
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Known secondary structure (DSSP) S
GGGGS
SS
SSS




SS
S


S








Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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