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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7vpnB_

Fold library idPDB HeaderMoleculeTitle
c7vpnB_2.60PDB header: dna binding proteinChain: B: PDB Molecule: cctet molecule;


Added to library: Tue Jun 21 21:16:16 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence ETLPSLLLIDEAAAVLGRMIQGLRTGIPYIHTENDSIKANPILRTALWQAAYVLEKAYRRRYRVPWTARR
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Known secondary structure (DSSP)


SS




S
S
TS
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence YMRELTPRQDGRNANREAVMAKEFPPGAELNSDHPVQEILPAMIIDAEDHILFCYLPSCVSPAIMTIIDA
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Known secondary structure (DSSP) TS
SS

S

S


TTT

SS


S

TT
BTT
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence AVGTLATMTPGVLTFAPAWWPVGHENQLPGPASTLKPPKGEGRMFLSDIPIASALVGAILAQINQPLFES
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Known secondary structure (DSSP)




SSB

TT
TTS

B

TTT
STTS

 .........220.........230.........240.........250.........260.........270.........280
Sequence GVKVLRELYSNSKLTKDHSTVSKIIEIWFSPFSSLSLIVNRATPIHRDTSGPIEGMDILVTGGNYSNGVL
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Known secondary structure (DSSP)
TTSSSST

SSSSS




SS
TT


S

 .........290.........300.........310.........320.........330.........340.........350
Sequence VTPSFNRRWTYNPGCVVALLGKLVLHGVPEVDGERYCMAHFWRERLFDAAGVPFPYPSKWQESYTNIPEA
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Known secondary structure (DSSP) GGGT

TT

TTT




SS

T






BGGGGGTT



 .
Sequence L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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