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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7vg2A_

Fold library idPDB HeaderMoleculeTitle
c7vg2A_3.10PDB header: rna binding protein/rnaChain: A: PDB Molecule: dicer-like 3;


Added to library: Sat Oct 30 08:40:26 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SAAGSKKRKELHGTTCANALSGTWGENIDGATFQAYKFDFCCNISGEVYSSFSLLLESTLAEDVGKVEMD
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Known secondary structure (DSSP)

TT
SS





SSS

S
TT
SS

SSSS




SS


SSSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LYLVRKLVKASVSPCGQIRLSQEELVKAKYFQQFFFNGMFGKLFVGEFLLQTDTSSLWHPAFMFLLLPVE
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Known secondary structure (DSSP)
SS


TS
SS



TTTS

SSSS
TTS





 .........150.........160.........170.........180.........190.........200.........210
Sequence TATIDWSAINSCASIVEFLKKNNLIHFANASSDKNSLEELVVIAIHTGRIYSIVEAVSDSSAMSPFGYAT
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SS

SSTTSS
SSS


TT

TTSB


SB
 .........220.........230.........240.........250.........260.........270.........280
Sequence YAEYFNKKYGIVLAHPNQPLMKLKQSHHAHNLLVDFNEEVRKRKPNIHAHLPPELLARIDVPRAVLKSIY
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Known secondary structure (DSSP) T



S

SS







TTS

S










GGG



T
 .........290.........300.........310.........320.........330.........340.........350
Sequence LLPSVMHRLESLMLASQLREEIDCSIDNFSISSTSILEAVTTLTCPESFSMERLELLGDSVLKYVASCHL
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Known secondary structure (DSSP) T



TT



T

TTS
SS

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence FLKYPDKDEGQLSRQRQSIISNSNLHRLTTSRKLQGYIRNGAFEPRRWTAPGQFSLFPVPCKCGIDTREV
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Known secondary structure (DSSP)
SS

S
TTT
TTS






TTT


TT


SS




SS

SSS
 .........430.........440.........450.........460.........470.........480.........490
Sequence PLDPKFFTENMTIKIGKSCDMGHRWVVSKSVSDCAEALIGAYYVSGGLSASLHMMKWLGIDVDFDPNLVV
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Known secondary structure (DSSP)
S
TTS

SS

BT


TTS

ST
S



 .........500.........510.........520.........530.........540.........550.........560
Sequence EAINRVSLRCYIPKEDELIELERKIQHEFSAKFLLKEAITHSSLRESYSYERLEFLGDSVLDFLITRHLF
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Known secondary structure (DSSP) TTTSSS




SST


SSSB
GGG

S

T
 .........570.........580.........590.........600.........610.........620.........630
Sequence NTYEQTGPGEMTDLRSACVNNENFAQVAVKNNLHTHLQRCATVLETQINDYLMSFQKPDETGRSIPSIQG
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Known secondary structure (DSSP)
SS

TTTS
TTGGGS
B


S
B

SSSS

B
SS

 .........640.........650.........660.........670.........680.........690.........700
Sequence PKALGDVVESIAGALLIDTRLDLDQVWRVFEPLLSPLVTPDKLQLPPYRELNELCDSLGYFFRVKCSNDG
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Known secondary structure (DSSP)
TTT
TTTT
S


TTT



T



S
 .........710.........720.........730.........740.........750.........760.........770
Sequence VKAQATIQLQLDDVLLTGDGSEQTNKLALGKAASHLLTQLEKRNVIPFIGPINMKKGGPRGTLHEFCKKH
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Known secondary structure (DSSP) SS
SS
SSSTT



B





SSST
 .........780.........790.........800.........810.........820.........830.........840
Sequence LWPMPTFDTSEEKSRTPFEKRTSFSSFTSTITLRIPNREAVMYAGEARPDKKSSFDSAVVELLYELERRK
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Known secondary structure (DSSP) T









SS






S

B



TTS




S
BSSTT
 .....
Sequence IVIIQ
Predicted secondary structure

SS confidence




Known secondary structure (DSSP) S
B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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