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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7vf5A_

Fold library idPDB HeaderMoleculeTitle
c7vf5A_3.00PDB header: rna binding proteinChain: A: PDB Molecule: protein virilizer homolog;


Added to library: Sat Sep 17 08:26:51 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence VPPMTYDPYDRELVPLLYFSCPYKTTFEIEISRMKDQGPDKENSGAIEASVKLTELLDLYREDRGAKWVT
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Known secondary structure (DSSP)


S


TTS





SSS

SSS
S
S
T
SS

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence ALEEIPSLIIKGLSYLQLKNTKQDSLGQLVDWTMQALNLQVALRQPIALNVRQLKAGTKLVSSLAECGAQ
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Known secondary structure (DSSP) TTTT
SS

TTS
TTSTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence GVTGLLQAGVISGLFELLFADHVSSSLKLNAFKALDSVISMTEGMEAFLRGRQNEKSGYQKLLELILLDQ
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Known secondary structure (DSSP) TTSS
SS

SS

TTS

TS

 .........220.........230.........240.........250.........260.........270.........280
Sequence TVRVVTAGSAILQKCHFYEVLSEIKRLGDHLAEKTSSISEGEIERLINLLEEVFHLMETAPHTMIQQPVK
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Known secondary structure (DSSP)
TT


STSS


TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence SFPTMARITGPPERDDPYPVLFRYLHSHHFLELVTLLLSIPVTSAHPGVLQATKDVLKFLAQSQKGLLFF
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Known secondary structure (DSSP)



S
SS
S



STTTT

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence MSEYEATNLLIRALCHFYDQDEEEGLQSDGVIDDAFALWLQDSTQTLQCITELFSHFQRCTASEETDHSD
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Known secondary structure (DSSP) TTGGGTTS



TTSSS




 .........430.........440.........450.........460.........470.........480.........490
Sequence LLGTLHNLYLITFNPVGRSAVGHVFSLEKNLQSLITLMEYYSKEALGDSKSKKSVAYNYACILILVVVQS
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Known secondary structure (DSSP) GGGGSTTSSS
TTTTTSSSSSSS


 .........500.........510.........520.........530.........540.........550.........560
Sequence SSDVQMLEQHAASLLKLCKADENNAKLQELGKWLEPLKNLRFEINCIPNLIEYVKQNIDNLMTPEGVGLT
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Known secondary structure (DSSP)
S



S
TSTTTT


SGGGS
SSSSSTTST
 .........570.........580.........590.........600.........610.........620.........630
Sequence TALRVLCNVACPPPPVEGQQKDLKWNLAVIQLFSAEGMDTFIRVLQKLNSILTQPWRLHVNMGTTLHRVT
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Known secondary structure (DSSP) SS




TT

TSS
STTT



S
 .........640.........650.........660.........670.........680.........690.........700
Sequence TISMARCTLTLLKTMLTELLRGGSFEFKDMRVPSALVTLHMLLCSIPLSGRLDSDEQKIQNDIIDILLTF
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Known secondary structure (DSSP) TTSSSS






SS

TTSS

TT
 .........710.........720.........730.........740.........750.........760.........770
Sequence TQGVNEKLTISEETLANNTWSLMLKEVLSSILKVPEGFFSGLILLSELLPLPLPMQTTQVIEPHDISVAL
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Known secondary structure (DSSP) TTT

TTSSSSTTSTTTTTSS
GGGS


SSSS


 .........780.........790.........800.........810.........820.........830.........840
Sequence NTRKLWSMHLHVQAKLLQEIVRSFSGTTCQPIQHMLRRICVQLCDLASPTALLIMRTVLDLIVEDLQSTS
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Known secondary structure (DSSP) TTSTT


TTSS
TTS
 .........850.........860.........870.........880.........890.........900.........910
Sequence EDKEKQYTSQTTRLLALLDALASHKACKLAILHLINGTIKGDERYAEIFQDLLALVRSPGDSVIRQQCVE
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Known secondary structure (DSSP) TTS




TST

SSS



S
TT
 .........920.........930.........940.........950.........960.........970.........980
Sequence YVTSILQSLCDQDIALILPSSSEGSISELEQLSNSLPNKELMTSICDCLLATLANSESSYNCLLTCVRTM
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Known secondary structure (DSSP)
TTSSSS


SSTTS

GGGTS


SS

 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence MFLAEHDYGLFHLKSSLRKNSSALHSLLKRVVSTFSKDTGELASSFLEFMRQILNSDTSRTMSINAAELK
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Known secondary structure (DSSP) TTS
TTT

SSTTTTT



SS


 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence QLLQSKEESPENLFLELEKLVLEHSKDDDNLDSLLDSVVGLKQMLESSGDPLPLSDQDVEPVLSAPESLQ
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Known secondary structure (DSSP) T
SSS
TTS
S
TS
S

















 .........1130.........1140.........1150.........1160.........1170.........1180........
Sequence NLFNNRTAYVLASMWFTPFQAEEIDTDLDLVKVDLIELSEKCCSDFDLHSELERSFLSEPSSPGRTKT
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Known secondary structure (DSSP) TS



TTT
SS
SSSS
SS







TTSSS



TTSSSTTSSSS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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