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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7vdvA_

Fold library idPDB HeaderMoleculeTitle
c7vdvA_3.40PDB header: dna binding proteinChain: A: PDB Molecule: isoform 2 of transcription activator brg1;


Added to library: Wed Jun 22 04:56:23 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RGPTPFNQNQLHQLRAQIMAYKMLARGQPLPDHLQMAVDPVEILQEREYRLQARIAHRIQELENLPGSLA
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Known secondary structure (DSSP)

S
TT
ST





T

S
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence GDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIE
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Known secondary structure (DSSP) TTT



TGGG


TT











S
 .........150.........160.........170.........180.........190.........200.........210
Sequence QERKRRQKHQEYLNSILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKKLIDQKKDKRLAYLLQ
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Known secondary structure (DSSP) T


SSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence QTYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLME
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Known secondary structure (DSSP)


S


TTTTS


S
SS


T





TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence HKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKH
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Known secondary structure (DSSP) TS






T
TTS


SSTTT

ST
 .........360.........370.........380.........390.........400.........410.........420
Sequence ILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCST
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Known secondary structure (DSSP) TTS

SSSGGGGSSSS



S
SSS

S
S

STT
 .........430.........440.........450.........460.........470.........480.........490
Sequence FEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLY
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Known secondary structure (DSSP)


SSSS


SS

S

SSSSS
SSGGG





TTS







 .........500.........510.........520.........530.........540.........550.........560
Sequence RHMQAKGVLLTDGSGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLD
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Known secondary structure (DSSP) T






S

SGGGSTSS
SSS

S
 .........570.........580.........590.........600.........610.........620.........630
Sequence RILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLST
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Known secondary structure (DSSP) T

S
TT


SSS
STT



 .........640.........650.........660.........670.........680.........690.........700
Sequence RAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQ
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Known secondary structure (DSSP) SSS


TT

SS

SSTTTSSTT

S



TTS
 .........710.........720.........730.........740.........750.........760.........770
Sequence KVIQAGMFDQKSSSHERRAFLQAILEHEEQDEEEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEAR
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Known secondary structure (DSSP) TTTT
TTSS

SSGGGTT




S


TT
SSTTGGG
 .........780.........790.........800.........
Sequence NPKRKPRLMEEDELPSWIIKEKMFGRGSRHRKEVDYSDS
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Known secondary structure (DSSP)
TT
SS
TTSGGGTT




SSS







TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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