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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c7v8hB_ | 2.46 | PDB header: ligase | Chain: B: PDB Molecule: ring-type e3 ubiquitin transferase; |
Added to library: Wed Jun 22 16:09:23 2022 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | N | E | F | Y | L | K | T | W | S | E | W | E | K | N | G | T | P | G | E | Q | R | N | I | A | F | N | R | L | K | I | C | L | Q | N | Q | E | A | E | L | N | L | S | E | L | D | L | K | T | L | P | D | L | P | P | Q | I | T | T | L | E | I | R | K | N | L | L | T | H | L | P |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | ![]() | ![]() | ![]() | T | T | S | S | T | T | S | ![]() | ![]() | ![]() | S | S | S | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | D | L | P | P | M | L | K | V | I | H | A | Q | F | N | Q | L | E | S | L | P | A | L | P | E | T | L | E | E | L | N | A | G | D | N | K | I | K | E | L | P | F | L | P | E | N | L | T | H | L | R | V | H | N | N | R | L | H | I | L | P | L | L | P | P | E | L | K | L | L | V |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | ![]() | ![]() | ![]() | S | S | S | T | T | ![]() | ![]() | ![]() | S | S | S | T | T | ![]() | ![]() | ![]() | S | S | S | T | T | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | V | S | G | N | R | L | D | S | I | P | P | F | P | D | K | L | E | G | L | A | L | A | N | N | F | I | E | Q | L | P | E | L | P | F | S | M | N | R | A | V | L | M | N | N | N | L | T | T | L | P | E | S | V | L | R | L | A | Q | N | A | F | V | N | V | A | G | N | P | L | S |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | T | T | ![]() | ![]() | ![]() | S | S | S | T | T | ![]() | ![]() | ![]() | S | S | S | S | G | G | G | G | G | S | T | T | ![]() | ![]() | ![]() | T | T | S |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | |||||||||
Sequence | G | H | T | M | R | T | L | Q | Q | I | T | T | G | P | D | Y | S | G | P | R | I | F | F | S | M | G | ||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | S | T | T | S | ![]() | ![]() |
Download: | PDB structure | FASTA sequence |
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