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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7v7cE_

Fold library idPDB HeaderMoleculeTitle
c7v7cE_3.70PDB header: transferase/dna binding protein/viral prChain: E: PDB Molecule: ddb1- and cul4-associated factor 1;


Added to library: Tue Sep 6 19:13:26 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MTTVVVHVDSKAELTTLLEQWEKEHGSGQDMVPILTRMSQLIEKETEEYRKGDPDPFDDRHPGRADPECM
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Known secondary structure (DSSP)




SSS
TT
SS
S


TTTTTTGGGG


S


S

TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAVVFQEKEGIVENLFKWAREAD
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Known secondary structure (DSSP)

TTTTT

SGGGTTT

SSTTTSS

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence QPLRTYSTGLLGGAMENQDIAANYRDENSQLVAIVLRRLRELQLQEVALRQENKPAIEQRLILQYLTPLG
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Known secondary structure (DSSP) SGGGSTTTTTT


T
 .........220.........230.........240.........250.........260.........270.........280
Sequence EYQELLPIFMQLGSRELMMFYIDLKQTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSM
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Known secondary structure (DSSP) SSTTSTTTS
SS



TTSTTTT

SS
T
 .........290.........300.........310.........320.........330.........340.........350
Sequence AATGVSMCLYYLSYNQDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFD
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Known secondary structure (DSSP) TTTSSTSSSTTT
TTTSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence RYDGLRRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRKYFEAHLAIKLEQVKQSLQRTEG
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Known secondary structure (DSSP) S
TTT
TTT
TTTTTT


TTTTTSTTTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence GILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLLLQLISIACNWKTYYARND
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Known secondary structure (DSSP)











S


TTTGGGS
SS


T
TTS

S
SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence TVRFALDVLAILTVVPKIQLQLAESVDVLDEAGSTVSTVGISIILGVAEGEFFIHDAEIQKSALQIIINC
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Known secondary structure (DSSP) TTSGGGTS


TTSS

TSSSTT
S
 .........570.........580.........590.........600.........610.........620.........630
Sequence VCGPDNKSSEHTLAKMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLP
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Known secondary structure (DSSP) S





TTTT

SS
SSTTSST
 .........640.........650.........660.........670.........680.........690.........700
Sequence LFSSCQIQQLMKEPVLQDKRSDHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQSRISFPEKE
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Known secondary structure (DSSP) TBTTBTTTTTTS


GGGTTTTTTT


S

S

ST





S
 .........710.........720.........730.........740.........750.........760.........770
Sequence LLLLIRNHLISKGLGETATVLTKEADLPMTPPTLDSIITEYLREQHARCKNPVATCPPFSLFTPHQCPEP
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Known secondary structure (DSSP) TS

TTS

S




TT
SS

SS




TTS






 .........780.........790.........800.........810.........820.........830.........840
Sequence KQRRQAPINFTSRLNRRASFPKYGGVDGGCFDRHLIFSRFRPISVFREANEDESGFTCCAFSARERFLML
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Known secondary structure (DSSP)

SSB

SSTTSSSTTSSBT
TTSS


TTSSS
B

B
SSSSBB
 .........850.........860.........870.........880.........890.........900.........910
Sequence GTCTGQLKLYNVFSGQEEASYNCHNSAITHLEPSRDGSLLLTSATWSQPLSALWGMKSVFDMKHSFTEDH
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Known secondary structure (DSSP) SSS
BTTT




SS



TTSS
SS
SS

SS



SSS
S
 .........920.........930.........940.........950.........960.........970.........980
Sequence YVEFSKHSQDRVIGTKGDIAHIYDIQTGNKLLTLFNPDLANNYKRNCATFNPTDDLVLNDGVLWDVRSAQ
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Known secondary structure (DSSP)
SSSTTTTSSS



TTT



SB



B
TTS
BB
BTTTTTT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence AIHKFDKFNMNISGVFHPNGLEVIINTEIWDLRTFHLLHTVPALDQCRVVFNHTGTVMYGAMLQSPFGSS
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Known secondary structure (DSSP)



SSSB


TTSSTTSSS




GGGTT
SSS






SS
 .........1060.........1070.........1080.........1090.........1100.........1110
Sequence FRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQGSMDALNMDTVCRLYEVGRQR
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Known secondary structure (DSSP) SSS





SS
SSS
SSS
SS

T



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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