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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7v6bA_

Fold library idPDB HeaderMoleculeTitle
c7v6bA_3.30PDB header: rna binding proteinChain: A: PDB Molecule: dicer-2, isoform a;


Added to library: Wed Jun 22 04:31:06 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PRGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVELARQQAMAV
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Known secondary structure (DSSP)


S


SSS
T
SSSSS
GGGT

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence RRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYVALSSLSVVIIDECHHGTGH
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Known secondary structure (DSSP)
SS

GGGTTSS


STTTS
GGGSGGG
SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence HPFREFMRLFTIANQTKLPRVVGLTGVLIKGNEITNVATKLKELEITYRGNIITVSDTKELENVMLYATK
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Known secondary structure (DSSP)
TTS
SSS

SSSS
TT

TTTS
B

SSSSS

STT



 .........220.........230.........240.........250.........260.........270.........280
Sequence PTEVMVSFPHQEQVLTVTRLISAEIEKFYVSLDLMNKKSFVKQLFNDFLYQMKEYGIYAASIAIISLIVE
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SS

S



 .........290.........300.........310.........320.........330.........340.........350
Sequence FDIKRRQAETLSVKLMHRTALTLCEKIRHLLVQKLQDMNVNTEEVIMNFSTPKVQRFLMSLKVSFADKDP
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Known secondary structure (DSSP) S

ST



SSS
T
S

T
 .........360.........370.........380.........390.........400.........410.........420
Sequence KDICCLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVSVLERKWQKSAIQQFRDGNANLMICSSV
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Known secondary structure (DSSP) TT


SS
TTTTTT



TS
S


 .........430.........440.........450.........460.........470.........480.........490
Sequence LEEGIDVQACNHVFILDPVKTFNMYVQSKGRARTTEAKFVLFTADKEREKTIQQIYQYRKAHNDIAEYLK
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Known secondary structure (DSSP) SSS


S

BSSS


SB
SSSS

TTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence DRVLEDIDPFTNENGAVLLPNNALAILHRYCQTIPTDAFGFVIPWFHVLQEDERDRIFGVSAKGKHVISI
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Known secondary structure (DSSP) SB






TT


TTTS


TT






SSGGGSSSB
 .........570.........580.........590.........600.........610.........620.........630
Sequence NMPVNCMLRDTIYSDPMDNVKTAKISAAFKACKVLYSLGELNERFVPKTLKERVASIADVHFEHWNKYGD
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Known secondary structure (DSSP)

TTSS

S



BSSSTT
B
TTSSB

TTT
 .........640.........650.........660.........670.........680.........690.........700
Sequence SVTAKDRTYKTECPLEFYDALPRVGEICYAYEIFLEPQFESCEYTEHMYLNLQTPRNYAILLRNKLPRLA
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Known secondary structure (DSSP)
S






TTTTT



SSS
S


TTTTSS

SS





 .........710.........720.........730.........740.........750.........760.........770
Sequence EMPLFSNQGKLHVRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKIWHPFFVLDRRSKENSYLVVPLIL
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Known secondary structure (DSSP)


SS


SS



STTS



TT


S
SSS


 .........780.........790.........800.........810.........820.........830.........840
Sequence QKCFDWELMTNFRRLPQSHGSNVQQREQQPAPRPEDFEGKIVTQWYANYDKPMLVTKVHRELTPLSYMEY
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Known secondary structure (DSSP)


TTS







S



TGGGSS

SS
SS


SS
TTS



 .........850.........860.........870.........880.........890.........900.........910
Sequence YEFTMSKYGNRIGDVVHKDKFMIEVRDLTEQLTFYVHKVILIPELCFNFNFPGDLWLKLIFLPSILNRMY
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Known secondary structure (DSSP) STTTS


S
SS














B
TTT


T
 .........920.........930.........940.........950.........960.........970.........980
Sequence FLLHAEALRKRFNTYLNLHLLPFNGTDYMPRPLEIDYSLKRNENPWQKYMEPVDLSRNLLSTYPVELDYY
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Known secondary structure (DSSP) TT
TTSTTTSTT








SSSS



SS
GGG



TTTS
TT

 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence YHFSVGNVCYWAKNQFHMPTGNIYVKPLLILQKTVSKEHITPAEQGEFLAAITASSAADVFDMERLEILG
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Known secondary structure (DSSP) TS


TTS
SS



S







GGG




B
GGG

S

S
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence DSFLKLSATLYLASKYSDWNEGTLTEVKSKLVSNRNLLFCLIDADIPKTLNTIQFTPRYTWLPPGISLPH
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Known secondary structure (DSSP) STTS
SSTTGGGS
B
S


TTTS


TTS
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence NVLALWRENPEFAKIIGPHNLRDLALGDEESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCV
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Known secondary structure (DSSP)


TT


GGGGTT

S

SSSTT

T
 .........1200.........1210.........1220.........1230.........1240.........1250.........1260
Sequence GLVTIPNKVIADTLEALLGVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGNTTEIDGFLINHY
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Known secondary structure (DSSP) TTTSS


SSS
SGGGSSS




TT
 .........1270.........1280.........1290.........1300.........1310.........1320.........1330
Sequence YLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRS
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Known secondary structure (DSSP) S


SSTB
SS
SS

SS

S
TTS
 .........1340.........1350.........1360.........1370.........1380.........1390.........1400
Sequence ALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVTNYVRILLEEADVNVDVPKALGDV
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Known secondary structure (DSSP) S
TTTT
GGG
B


TSS

S

SS



SS
S
 .........1410.........1420.........1430.........1440.........1450.........1460.........1470
Sequence LEALIAAVYLDCRDLQRTWEVIFNLFEPELQEFTRKVPINHIRQLVEHKHAKPVFSSVSCQFTCMEKTIK
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Known secondary structure (DSSP)

S



T
SS






TT
 .........1480.........1490......
Sequence VYGFGSNKDQAKLSAAKHALQQLSKC
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Known secondary structure (DSSP)



SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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