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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7v55A_

Fold library idPDB HeaderMoleculeTitle
c7v55A_3.00PDB header: hydrolaseChain: A: PDB Molecule: phospholipase d;


Added to library: Sat Aug 20 08:59:54 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SNLFSEKRAGNRVRFFTTGRDYFSDLASALDSASSSIFITGWQVNYDVLLDGRRSLWQCLRQALERSPAL
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Known secondary structure (DSSP)

BS



STT

SS
B
TT
BSSSSSB
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence KVYVMPWLSPDFETMLAVFQLNAGLEGGARAFCTPAIQQSDMQGLGVAFSHHQKSVVIDNRIGYVGGIDL
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Known secondary structure (DSSP) B



TT
SSS



B



S
GGGGGG

B


TTTS

B
 .........150.........160.........170.........180.........190.........200.........210
Sequence AYGRRDDNDFSLDASGRRGNDAYNPGLPHLGWMAEDNARLAADQPRMPWQDVHCRIEGPSVYDLARNFID
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Known secondary structure (DSSP)
TT



SS


BGGGS
GGGS

TTS









TTSB




STT
 .........220.........230.........240.........250.........260.........270.........280
Sequence RWNGQQAYLAKTPALQDTALVRSALEAVMKWLNSLAELDPPTPCWINAPEQLPQEPEVRRGGMTVQVLRS
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Known secondary structure (DSSP) T

SSTTTT











STTTS







SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence AAARMLEQEQAGRLGAGVNLPLQVGVSTEGVQSNCKDAMLLAISGAQQFIYIENQFFQSEFGKEGEVFKD
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Known secondary structure (DSSP)
TT





TTB
SSS
S
SSS
B



SS




SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence LPLSGPMASLRDVGSLRRDFVVRIRLEEALEQRDLWLLDWAEVEKIAQEPGTEARQFLKSMLAMWGVNAQ
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Known secondary structure (DSSP)
SS

GGGS
TTT
TTSS
S
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence GWLTHKLGEAQHGLLNEIGEALARRIERAIQREHPFHVYLVLPVHPEGALNVPNIMHQVHLTQQSLVFGE
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Known secondary structure (DSSP) SS


SS



T



SS
SS
TTSTTST
 .........500.........510.........520.........530.........540.........550.........560
Sequence QSLVKRIQRQMALKALEGKSDPAQAREIIERKDARGRPVYEQQDWSRYLTLLNLRTWAVLGGRVVTEQIY
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Known secondary structure (DSSP) T
TTTTS
TT
B
TTS
BGGGGS
GGGTTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence VHSKLLIADDRVAILGSANINDRSLQGERDSELAVMVRDSEPLTVRLDGKNDAIVGKAIHQLRVNLWKKH
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Known secondary structure (DSSP)

TTTS

BSSSSSSBSS
TTSSS
 .........640.........650.........660.........670.........680.........690.........700
Sequence FGLSQGPGGFVKPASELSAYLSIPAAQEAWEAIQTLAKENTRAYERTFNFIPQNISQTQLQLTPEPPKGF
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Known secondary structure (DSSP) TSS

S

SSB

GGGTTSTT
TTS
SSS

SB
SS



SSS

TT
 .........710.........720.........730.........740.........750.........760.........770
Sequence EDGFPASIWPTWAYRKPGELRAGGQLMEPMPYQEIFWRSSNLTSVKTFPPPNGVSGFITALPTSWTRGER
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Known secondary structure (DSSP) TT

B

SSTTSSSS
GGG
SS

TTSGGGTS

SSS








S
BSS

TTTTTT

 .........780.
Sequence NDSGLNLSILA
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Known secondary structure (DSSP)



S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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