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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7v53A_

Fold library idPDB HeaderMoleculeTitle
c7v53A_2.10PDB header: hydrolaseChain: A: PDB Molecule: phospholipase d;


Added to library: Sat Aug 20 08:59:59 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SPCVAISAPGCFIKGSNLFSEKRAGNRVRFFTTGRDYFSDLASALDSASSSIFITGWQVNYDVLLDGRRS
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Known secondary structure (DSSP)
TTTSTT
TTSS

STT
S


SS

SS


TT
BSSSS
B
 .........80.........90.........100.........110.........120.........130.........140
Sequence LWQCLRQALERSPALKVYVMPWLSPSGSLGTYDFETMLAVFQLNAGLEGGARAFCTPAIQQSDMQGLGVA
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Known secondary structure (DSSP)
TT
B

S
GGGS

TTTT
SSS



B



S
GGGGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence FSHHQKSVVIDNRIGYVGGIDLAYGRRDDNDFSLDASGRRGNDAYNPGLPHLGWMAEDEHVSSMGLMMAT
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Known secondary structure (DSSP)

B


TTTS

S
TT



TT




TTS
GGGS

TTS




TTTSB
 .........220.........230.........240.........250.........260.........270.........280
Sequence LFDLSSSIRAIANLIADNLDIEPELERRLRAWLEELRTAALNLPEALRIKSLLLINQWMSETELGQVLTL
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Known secondary structure (DSSP) S



TT


TT

SS

S
 .........290.........300.........310.........320.........330.........340.........350
Sequence IGSLFWTLHRLMQARAGGHQQPYRYLDEAPQPLASPDNARLAADQPRMPWQDVHCRIEGPSVYDLARNFI
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Known secondary structure (DSSP)

SSS

GGGTTS


B

TT


TTS





STT
 .........360.........370.........380.........390.........400.........410.........420
Sequence DRWNGQQAYLAKTPALQDTALVRSALEAVMKWLNSLAAAAGLENYLDEKRNLRLELDPPTPCWINAPEQL
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Known secondary structure (DSSP) TS


TT
TTTS












SGGGS
 .........430.........440.........450.........460.........470.........480.........490
Sequence PQEPEVRRGGMTVQVLRSAAARMLEQEQAGRLGAGVNLPLQVGVSTEGVQSNCKDAMLLAISGAQQFIYI
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Known secondary structure (DSSP)







SS
T





TT

SSS

SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence ENQFFQSEFGKEGEVFKDLPLSGPMASLRDVGSLRRDFVVRIRLEEALEQRDLWLLDWAEVEKIAQEPGT
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Known secondary structure (DSSP) S





SS




TT
SS

GGGS
TTT
GGGS


SS
 .........570.........580.........590.........600.........610.........620.........630
Sequence EARQFLKSMLAMWGVNAQGWLTHKLGEAQHGLLNEIGEALARRIERAIQREHPFHVYLVLPVHPEGALNV
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Known secondary structure (DSSP) S


SS



T




SS
SS
TTS
 .........640.........650.........660.........670.........680.........690.........700
Sequence PNIMHQVHLTQQSLVFGEQSLVKRIQRQMALKALEGKSDPAQAREIIERKDARGRPVYEQQDWSRYLTLL
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Known secondary structure (DSSP) TTSTT
TTTTS
TTTT
B
TTS
BGGGGS
GGGT
 .........710.........720.........730.........740.........750.........760.........770
Sequence NLRTWAVLGGRVVTEQIYVHSKLLIADDRVAILGSANINDRSLQGERDSELAVMVRDSEPLTVRLDGKND
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Known secondary structure (DSSP) TT


TTTS

SSSSSSSB
S
TTSSS
 .........780.........790.........800.........810.........820.........830.........840
Sequence AIVGKAIHQLRVNLWKKHFGLSQGPGGFVKPASELSAYLSIPAAQEAWEAIQTLAKENTRAYERTFNFIP
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Known secondary structure (DSSP) TT
S

SS
SSB

GGGGGGTT
TTS
SSS
 .........850.........860.........870.........880.........890.........900.........910
Sequence QNISQTQLFEDGFPASIWPTWAYRKPGELRAGGQLMEPMPYQEIFWRSSNLTSVKTFPPPNGVSGFITAL
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Known secondary structure (DSSP)
SB
SS


TT

B

SSTTS
SS
GGG
SS

TTSGGGTS

SS








SS
BSS
 .........920.........930
Sequence PTSWTRGERNDSGLNLSILA
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Known secondary structure (DSSP)
TTTTTT





S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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