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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7v09A_

Fold library idPDB HeaderMoleculeTitle
c7v09A_2.00PDB header: sugar binding proteinChain: A: PDB Molecule: multiple sugar transport system periplasmic sugar-binding


Added to library: Wed Jun 22 00:09:34 2022
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence SSVTIEFMHSSVEQERQAVITKLIEKFEKENPSITVKQVPVEEDAYNTKVITLARTGALPEVIEVSHDYA
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Known secondary structure (DSSP)

S

S
TT

TTTTT


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence KVMDKEQLLDRDAIGEAIKAVGEKTFYDGILRVVRTEDGTAWTGVPISAWLSGVWYHKDVLAAAGIKEPH
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Known secondary structure (DSSP) TT
B

GGGB
TTTTTTTB
TTSSSBS
TT




 .........150.........160.........170.........180.........190.........200.........210
Sequence NWQQLLKASQMLNDPAKKHYGIALPTAESVMTEQAFSQFALSGGANVFDAQGNIQIDTPEMLNALAFYKE
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Known secondary structure (DSSP) SS
BGGGTB
S
B


SSSTT

SB
TTS
B


S
 .........220.........230.........240.........250.........260.........270.........280
Sequence LAKNTMPGSNDVMEIKDAFMNGSAPMAVYSTYILPAVFKEGDPANLGFVVPTEKSSAVYGMVTSLTITTG
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Known secondary structure (DSSP) GGGS
SS


TS
STTS
GGG

BSSSB
BBSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence QTEEETKAAEKFVTWMEQAQNASDWVMMSPGAALPVNKLVVDTESWKNNEVIKAFGQLPYELIAQFPNVQ
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Known secondary structure (DSSP)

TSTTSTTTSB

BTTSTTST
TTTTTGGGB
 .........360.........370.........380.........390.........400...
Sequence VFGAVGDKNFTRMGDVTGSGIISSMVHNVTVGQQDLNTTLSNSQKRLTDLVSQ
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Known secondary structure (DSSP)
TTTT
TTTTS


T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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