PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7uptF_

Fold library id	PDB Header	Molecule	Title
c7uptF_	3.50	PDB header: protein transport	Chain: F: PDB Molecule: outer mitochondrial transmembrane helix translocase;

Links to external resources
Added to library: Wed Jun 22 02:49:16 2022

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L S E Y E M S I A A H L V D P L N M H V T W S D I A G L D D V I T D L K D T V I L P I K G V L L Y G P P G C G K T L I A K A T A K E A G C R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T
G G G
G G G S
S
T
S S S T T T T T S S S S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F I N L Q P S T L T D K W Y G E S Q K L A A A V F S L A I K L Q P S I I F I D Q I D S F A M M K A Q F M S L W Q V I V M G A T N R P Q D L D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T G G G T
S S S S
S S
T T T T
S
T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S A I M R R M P T R F H I N Q P A L K Q R E A I L K L I L K N E N V D R H V D L L E V A Q E T D G F S G S D L K E M C R D A A L L C V R E Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T S S S
T T
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . .

Sequence V N I R P V Q Q Q D L H R A I E K M K K S K D A A F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	S	E	Y	E	M	S	I	A	A	H	L	V	D	P	L	N	M	H	V	T	W	S	D	I	A	G	L	D	D	V	I	T	D	L	K	D	T	V	I	L	P	I	K	G	V	L	L	Y	G	P	P	G	C	G	K	T	L	I	A	K	A	T	A	K	E	A	G	C	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S							T	T				G	G	G					G	G	G	S		S												T												S	S	S	T	T							T	T	T	S	S	S	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	I	N	L	Q	P	S	T	L	T	D	K	W	Y	G	E	S	Q	K	L	A	A	A	V	F	S	L	A	I	K	L	Q	P	S	I	I	F	I	D	Q	I	D	S	F	A	M	M	K	A	Q	F	M	S	L	W	Q	V	I	V	M	G	A	T	N	R	P	Q	D	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	G	G	G	T			S	S	S	S																S	S								T	T	T	T																					S			T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	A	I	M	R	R	M	P	T	R	F	H	I	N	Q	P	A	L	K	Q	R	E	A	I	L	K	L	I	L	K	N	E	N	V	D	R	H	V	D	L	L	E	V	A	Q	E	T	D	G	F	S	G	S	D	L	K	E	M	C	R	D	A	A	L	L	C	V	R	E	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																												T	S	S	S				T	T											S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Sequence	V	N	I	R	P	V	Q	Q	Q	D	L	H	R	A	I	E	K	M	K	K	S	K	D	A	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S															T	T