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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c7um0d_

Fold library idPDB HeaderMoleculeTitle
c7um0d_3.80PDB header: transcriptionChain: D: PDB Molecule: dna-directed rna polymerase;


Added to library: Sat Jul 9 08:45:56 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MGKKLSLIDFNEIYNEENLITRANPIENHEFSDDGIYSERIFGSYNEDDDDKDIDTIGWINIEPYYIINP
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S
SB
SSSB
SSSTT
TTTS

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SSS


TT



S


 .........80.........90.........100.........110.........120.........130.........140
Sequence ILFTIIKKCIPSINKIINYQQSIDQNGENIDLTEEIGEDDYIGLVKFKDNFDDLLEKYTDKKKYQKEYDF
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Known secondary structure (DSSP) SS

TTTS






SSS




TTTS
SS
S

TTTGGG

TTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LIENHDKIFINKLPVFSHKLRPATLLTGSKGKVLAFDEINNYYNFVIEYINQINEGVVSDDSIDLLLLPL
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Known secondary structure (DSSP) S
GGG


TTSS




TT




TTTS


S




 .........220.........230.........240.........250.........260.........270.........280
Sequence LYNMQFYANNILTRIISEYLRGKKGFLRKNIMGSRINFSARNVITPLIGHPIDEVAMPYKTFAELYKFQL
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Known secondary structure (DSSP) TTTTSSTTSSTTTTTSS


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SS
TT

T
 .........290.........300.........310.........320.........330.........340.........350
Sequence INLISKVKGINYNEALKFWEKGILGFNQELYNYMEELITKTKGGCTFLLNRNPTISIGSILYLKIGLIKK
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Known secondary structure (DSSP) T

S

SSSS

SS

STTSS

 .........360.........370.........380.........390.........400.........410.........420
Sequence DYKDLTLGISNNLLSALSGDYDGDVLNIIPVFDNKMKEHFSLLSPQNFLVDRNNGRFNGDFDLQKDQILG
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Known secondary structure (DSSP)
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STTT

TTT




GGGSTTTTSB
TTTSSB
STTS

T
 ......
Sequence IFILNN
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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