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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7uhgA_

Fold library idPDB HeaderMoleculeTitle
c7uhgA_3.00PDB header: transport proteinChain: A: PDB Molecule: voltage-dependent l-type calcium channel subunit alpha-1d;


Added to library: Tue Jun 21 21:08:47 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SIVEWKPFDIFILLAIFANCVALAIYIPFPEDDSNSTNHNLEKVEYAFLIIFTVETFLKIIYVRNGWNLL
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Known secondary structure (DSSP)

STTSTTS



STT






SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence DFVIVIVGLFSVILEQLTDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYA
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Known secondary structure (DSSP)


GGGGGGGGGGGGGT
TS
 .........150.........160.........170.........180.........190.........200.........210
Sequence IIGLELFIGKMHKTCFFADSDIVAEEDPAPCAFSGNGRQCTANGTECRSGWVGPNGGITNFDNFAFAMLT
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Known secondary structure (DSSP)
SS
TTTTSS
BSSSS




SSSSS




TT



TTTTSS
SSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence VFQCITMEGWTDVLYWMNDAMGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLR
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Known secondary structure (DSSP) TTSSS
SSSTGGGGT
 .........290.........300.........310.........320.........330.........340.........350
Sequence EKQQLEEDLKGYLDWITQAEDCRAAVKSVTFYWLVIVLVFLNTLTISSEHYNQPDWLTQIQDIANKVLLA
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Known secondary structure (DSSP) TTTTTSS



ST

TT

 .........360.........370.........380.........390.........400.........410.........420
Sequence LFTCEMLVKMYSLGLQAYFVSLFNRFDCFVVCGGITETILVELEIMSPLGISVFRCVRLLRIFKVTRHWT
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Known secondary structure (DSSP)
STT


TTTTGGGGGGGSGGG
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence SLSNLVASLLNSMKSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETQTKRSTFDNFPQALLTVFQILTG
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Known secondary structure (DSSP) SSTTTT




SSS

SS

SST
 .........500.........510.........520.........530.........540.........550.........560
Sequence EDWNAVMYDGIMAYGGPSSSGMIVCIYFIILFICGNYILLNVFLAIAVDNLADAESLNTAQKEEAEEKIR
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Known secondary structure (DSSP) TTTTT
SSTTTTGGGTT


 .........570.........580.........590.........600.........610.........620.........630
Sequence VGCHKLINHHIFTNLILVFIMLSSAALAAEDPIRSHSFRNTILGYFDYAFTAIFTVEILLKMTTFGNYFN
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Known secondary structure (DSSP) T
SST

SS
SS



 .........640.........650.........660.........670.........680.........690.........700
Sequence LLDMLVVGVSLVSFVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGV
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Known secondary structure (DSSP)

GGGTGGGGGGG
TTT
 .........710.........720.........730.........740.........750.........760.........770
Sequence QLFKGKFYRCTDEAKSNPEECRGLFILYKDGDVDSPVVRERIWQNSDFNFDNVLSAMMALFTVSTFEGWP
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Known secondary structure (DSSP) TTTT
B
SSTT

STTTS
SGGG
TT



B

SS

SSTTSS
 .........780.........790.........800.........810.........820.........830.........840
Sequence ALLYKAIDSNGENIGPIYNHRVEISIFFIIYIIIVAFFMMNIFVGFVIVTFQEQGEKEYKNCELDKNQRQ
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Known secondary structure (DSSP) T

STT



TTS
GGGTTTGGG



SS

 .........850.........860.........870.........880.........890.........900.........910
Sequence CVEYALKARPLRRYIPKNPYQYKFWYVVNSSPFEYMMFVLIMLNTLCLAMQHYEQSKMFNDAMDILNMVF
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Known secondary structure (DSSP) S









SSS


TT

 .........920.........930.........940.........950.........960.........970.........980
Sequence TGVFTVEMVLKVIAFKPKGYFSDAWNTFDSLIVIGSIIDVALSESITFFRLFRVMRLVKLLSRGEGIRTL
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Known secondary structure (DSSP)
TTS


GGGTTT

TTT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence LWTFIKSFQALPYVALLIAMLFFIYAVIGMQMFGKVAMRDNNQINRNNNFQTFPQAVLLLFRCATGEAWQ
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Known secondary structure (DSSP)
TTTTB


SSSSSSSSS
SSSTTSS
 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence EIMLACLPGKLCDPESDYNPGEEYTCGSNFAIVYFISFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGP
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Known secondary structure (DSSP) TTSSS
BB
TTS


TT

B



TTTTT

TTT

 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence HHLDEFKRIWSEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVMFNAT
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Known secondary structure (DSSP) S
SS

S
GGGTS
TTTS

SS
TTTTS





TT
T
 .........1200.........1210.........1220.........1230
Sequence LFALVRTALKIKTEGNLEQANEELRAVIKKIWKKTSMKLL
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Known secondary structure (DSSP) SS


TT
TS


TTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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